RNA–Protein interactions for RNA: ENST00000487935.1

OPTN-212, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 511 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-212ENST00000487935 SLITRK1Q96PX8 696 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 RNF38Q9H0F5 515 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 DPEP3Q9H4B8 488 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 VPS45Q9NRW7 570 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 TMEM63CQ9P1W3 806 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 NXF1Q9UBU9 619 aaKnown RBP12.97□□□□□ -0.33
OPTN-212ENST00000487935 MAPK8IP1Q9UQF2 711 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 NME7Q9Y5B8 376 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 CPQQ9Y646 472 aa12.97□□□□□ -0.33
OPTN-212ENST00000487935 K7EQS6 105 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 CLDN5O00501 218 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 PHACTR2O75167 634 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 OLFM2O95897 454 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 OAS1P00973 400 aaKnown RBP12.96□□□□□ -0.33
OPTN-212ENST00000487935 CACNA2D1P54289 1103 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 SEC13P55735 322 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 MYL6P60660 151 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 IFRD2Q12894 506 aaPredicted RBP12.96□□□□□ -0.33
OPTN-212ENST00000487935 TAF10Q12962 218 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 BMT2Q1RMZ1 405 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 USP39Q53GS9 565 aaKnown RBP12.96□□□□□ -0.33
OPTN-212ENST00000487935 C2orf27AQ580R0 203 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 STPG1Q5TH74 334 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 C11orf74Q86VG3 221 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 DDX42Q86XP3 938 aaKnown RBP eCLIP12.96□□□□□ -0.33
OPTN-212ENST00000487935 ADGRG2Q8IZP9 1017 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 NUP93Q8N1F7 819 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 TRIML1Q8N9V2 468 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 B3GALNT2Q8NCR0 500 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 ZNF516Q92618 1163 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 B3GNT5Q9BYG0 378 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 GTPBP4Q9BZE4 634 aaKnown RBP12.96□□□□□ -0.33
OPTN-212ENST00000487935 ZNF518BQ9C0D4 1074 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 SMOC1Q9H4F8 434 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 RXFP3Q9NSD7 469 aa12.96□□□□□ -0.33
OPTN-212ENST00000487935 ATP8B3O60423 1300 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 TM4SF5O14894 197 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 DCLK1O15075 740 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 EXOC3O60645 756 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 RTN3O95197 1032 aaPredicted RBP12.95□□□□□ -0.34
OPTN-212ENST00000487935 CYP17A1P05093 508 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 MBL2P11226 248 aaPredicted RBP12.95□□□□□ -0.34
OPTN-212ENST00000487935 YWHAQP27348 245 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 GBP1P32455 592 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 MRPS21P82921 87 aaKnown RBP12.95□□□□□ -0.34
OPTN-212ENST00000487935 CREB5Q02930 508 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 STIM1Q13586 685 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 MORC3Q14149 939 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 DHCR24Q15392 516 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 KNOP1Q1ED39 458 aaKnown RBP12.95□□□□□ -0.34
OPTN-212ENST00000487935 GAB4Q2WGN9 574 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 PDZD8Q8NEN9 1154 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 OVCA2Q8WZ82 227 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 TPSD1Q9BZJ3 242 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 XYLT2Q9H1B5 865 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 VRTNQ9H8Y1 702 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 TMEM30AQ9NV96 361 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 SMPD4Q9NXE4 827 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 CFAP97Q9P2B7 532 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 TBC1D14Q9P2M4 693 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 MMP17Q9ULZ9 603 aa12.95□□□□□ -0.34
OPTN-212ENST00000487935 NCOR2Q9Y618 2525 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 BCLAF3A2AJT9 711 aaKnown RBP12.94□□□□□ -0.34
OPTN-212ENST00000487935 CLSTN1O94985 981 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 CAVIN2O95810 425 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 APODP05090 189 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 EIF2DP41214 584 aaKnown RBP12.94□□□□□ -0.34
OPTN-212ENST00000487935 AP3M2P53677 418 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 CDH8P55286 799 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 BIRC3Q13489 604 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 ZNF667Q5HYK9 610 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 RNF43Q68DV7 783 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 KLHL10Q6JEL2 608 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 SASS6Q6UVJ0 657 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 RASSF3Q86WH2 238 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 GUF1Q8N442 669 aaKnown RBP12.94□□□□□ -0.34
OPTN-212ENST00000487935 CCDC33Q8N5R6 958 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 GOLGA5Q8TBA6 731 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 FBXO32Q969P5 355 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 TNIP3Q96KP6 325 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 CNOT6LQ96LI5 555 aaKnown RBP12.94□□□□□ -0.34
OPTN-212ENST00000487935 PNKPQ96T60 521 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 MED10Q9BTT4 135 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
OPTN-212ENST00000487935 INVSQ9Y283 1065 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 LAMA1P25391 3075 aa12.94□□□□□ -0.34
OPTN-212ENST00000487935 E2F8A0AVK6 867 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 PSMA7O14818 248 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 SCAMP3O14828 347 aaKnown RBP12.93□□□□□ -0.34
OPTN-212ENST00000487935 ALDH1A2O94788 518 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 ADH1CP00326 375 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 ADH5P11766 374 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 BMP6P22004 513 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 TIE1P35590 1138 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 PPP1R2P41236 205 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 PRCPP42785 496 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 SLC6A11P48066 632 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 CASP4P49662 377 aa12.93□□□□□ -0.34
OPTN-212ENST00000487935 CRY1Q16526 586 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms