RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 SLC4A11Q8NBS3 891 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 ATP2A3Q93084 1043 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 TMEM176AQ96HP8 235 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 FAM124BQ9H5Z6 455 aaPredicted RBP21.61■■□□□ 1.05
HDAC4-209ENST00000487617 ECT2Q9H8V3 914 aa21.61■■□□□ 1.05
HDAC4-209ENST00000487617 ZNF638Q14966 1978 aaKnown RBP21.6■■□□□ 1.05
HDAC4-209ENST00000487617 FAM92AA1XBS5 289 aa21.6■■□□□ 1.05
HDAC4-209ENST00000487617 EML3Q32P44 896 aa21.6■■□□□ 1.05
HDAC4-209ENST00000487617 ZNF528Q3MIS6 628 aa21.6■■□□□ 1.05
HDAC4-209ENST00000487617 SNX30Q5VWJ9 437 aa21.6■■□□□ 1.05
HDAC4-209ENST00000487617 GPRIN1Q7Z2K8 1008 aa21.6■■□□□ 1.05
HDAC4-209ENST00000487617 SRRTQ9BXP5 876 aaKnown RBP21.6■■□□□ 1.05
HDAC4-209ENST00000487617 LINC00597Q9H2U6 94 aa21.6■■□□□ 1.05
HDAC4-209ENST00000487617 ANAPC1Q9H1A4 1944 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 PRR23AA6NEV1 266 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 HHLA1C9JL84 531 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 COCHO43405 550 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 GNA14O95837 355 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 ZDHHC11BP0C7U3 371 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 ACO1P21399 889 aaKnown RBP21.59■■□□□ 1.05
HDAC4-209ENST00000487617 YWHAEP62258 255 aaKnown RBP21.59■■□□□ 1.05
HDAC4-209ENST00000487617 CETN1Q12798 172 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 GRSF1Q12849 480 aaKnown RBP eCLIP21.59■■□□□ 1.05
HDAC4-209ENST00000487617 NR1H3Q13133 447 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 TSSK4Q6SA08 328 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 ASCL5Q7RTU5 278 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 DDX42Q86XP3 938 aaKnown RBP eCLIP21.59■■□□□ 1.05
HDAC4-209ENST00000487617 DUSP16Q9BY84 665 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 CCSER2Q9H7U1 834 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 PNPLA8Q9NP80 782 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 PRMT8Q9NR22 394 aaPredicted RBP21.59■■□□□ 1.05
HDAC4-209ENST00000487617 TLR8Q9NR97 1041 aaKnown RBP21.59■■□□□ 1.05
HDAC4-209ENST00000487617 CFAP97Q9P2B7 532 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 CACNA1IQ9P0X4 2223 aa21.59■■□□□ 1.05
HDAC4-209ENST00000487617 KIF26AQ9ULI4 1882 aaPredicted RBP21.58■■□□□ 1.05
HDAC4-209ENST00000487617 PMM2O15305 246 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 FGFR1OPO95684 399 aaKnown RBP21.58■■□□□ 1.05
HDAC4-209ENST00000487617 TBXAS1P24557 533 aaPredicted RBP21.58■■□□□ 1.05
HDAC4-209ENST00000487617 GJA4P35212 333 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 TUBP50607 506 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 CCR3P51677 355 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 CCINQ13939 588 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 GAS6Q14393 721 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 MAMSTRQ6ZN01 415 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 Q6ZS52 159 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 CHFRQ96EP1 664 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 NT5C1BQ96P26 610 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 NACA2Q9H009 215 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 CLSTN2Q9H4D0 955 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 SCML2Q9UQR0 700 aa21.58■■□□□ 1.05
HDAC4-209ENST00000487617 TRDMT1O14717 391 aaKnown RBP21.57■■□□□ 1.04
HDAC4-209ENST00000487617 SCAMP3O14828 347 aaKnown RBP21.57■■□□□ 1.04
HDAC4-209ENST00000487617 NFATC1O95644 943 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 PGFP49763 221 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 PPP2R5DQ14738 602 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 TMEM196Q5HYL7 178 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 ARHGAP17Q68EM7 881 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 FSTL4Q6MZW2 842 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 TRIM59Q8IWR1 403 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 SYNPOQ8N3V7 929 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 SPEM1Q8N4L4 309 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 KIAA1958Q8N8K9 716 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 EXOC4Q96A65 974 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 SEMA4AQ9H3S1 761 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 RWDD2AQ9UIY3 292 aa21.57■■□□□ 1.04
HDAC4-209ENST00000487617 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.57■■□□□ 1.04
HDAC4-209ENST00000487617 SLC9A3R1O14745 358 aaPredicted RBP21.56■■□□□ 1.04
HDAC4-209ENST00000487617 P4HA2O15460 535 aa21.56■■□□□ 1.04
HDAC4-209ENST00000487617 CYP26A1O43174 497 aa21.56■■□□□ 1.04
HDAC4-209ENST00000487617 TLR5O60602 858 aa21.56■■□□□ 1.04
HDAC4-209ENST00000487617 CCDC192P0DO97 292 aa21.56■■□□□ 1.04
HDAC4-209ENST00000487617 CXCL12P48061 93 aa21.56■■□□□ 1.04
HDAC4-209ENST00000487617 GALK1P51570 392 aa21.56■■□□□ 1.04
HDAC4-209ENST00000487617 KIF11P52732 1056 aa21.56■■□□□ 1.04
HDAC4-209ENST00000487617 MARSP56192 900 aaKnown RBP21.56■■□□□ 1.04
HDAC4-209ENST00000487617 SATB1Q01826 763 aa21.56■■□□□ 1.04
HDAC4-209ENST00000487617 KCNH2Q12809 1159 aa21.56■■□□□ 1.04
HDAC4-209ENST00000487617 NAIF1Q69YI7 327 aaPredicted RBP21.56■■□□□ 1.04
HDAC4-209ENST00000487617 P2RY13Q9BPV8 354 aa21.56■■□□□ 1.04
HDAC4-209ENST00000487617 PATJQ8NI35 1801 aa21.55■■□□□ 1.04
HDAC4-209ENST00000487617 SLC8A3P57103 927 aa21.55■■□□□ 1.04
HDAC4-209ENST00000487617 SGO2Q562F6 1265 aa21.55■■□□□ 1.04
HDAC4-209ENST00000487617 PPM1KQ8N3J5 372 aa21.55■■□□□ 1.04
HDAC4-209ENST00000487617 ANKRD52Q8NB46 1076 aa21.55■■□□□ 1.04
HDAC4-209ENST00000487617 ATRIPQ8WXE1 791 aa21.55■■□□□ 1.04
HDAC4-209ENST00000487617 CD101Q93033 1021 aa21.55■■□□□ 1.04
HDAC4-209ENST00000487617 ZFRQ96KR1 1074 aaKnown RBP21.55■■□□□ 1.04
HDAC4-209ENST00000487617 FBRSL1Q9HCM7 1045 aaKnown RBP21.55■■□□□ 1.04
HDAC4-209ENST00000487617 ZSCAN32Q9NX65 697 aa21.55■■□□□ 1.04
HDAC4-209ENST00000487617 PCDHGA2Q9Y5H1 932 aa21.55■■□□□ 1.04
HDAC4-209ENST00000487617 A0A1W2PQH9 124 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 E2F8A0AVK6 867 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 EGFP01133 1207 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 AFPP02771 609 aaKnown RBP21.54■■□□□ 1.04
HDAC4-209ENST00000487617 CD19P15391 556 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 GOLGA7BQ2TAP0 167 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 CLEC17AQ6ZS10 378 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 CREBRFQ8IUR6 639 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 UBR7Q8N806 425 aa21.54■■□□□ 1.04
HDAC4-209ENST00000487617 MLKLQ8NB16 471 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms