RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 HIST1H2AAQ96QV6 131 aa6.66□□□□□ -1.34
CUL3-211ENST00000487558 RTKNQ9BST9 563 aa6.66□□□□□ -1.34
CUL3-211ENST00000487558 SRP68Q9UHB9 627 aaKnown RBP6.66□□□□□ -1.34
CUL3-211ENST00000487558 HMX3A6NHT5 357 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 AHRRA9YTQ3 701 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 ZSCAN9O15535 394 aaPredicted RBP6.65□□□□□ -1.34
CUL3-211ENST00000487558 DNPH1O43598 174 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 AGR2O95994 175 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 PYGLP06737 847 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 ANXA6P08133 673 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 CST5P28325 142 aaPredicted RBP6.65□□□□□ -1.34
CUL3-211ENST00000487558 DDIT3P35638 169 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 GATMP50440 423 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 PDE6CP51160 858 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 PGDP52209 483 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 BCAT1P54687 386 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 TBX2Q13207 712 aaPredicted RBP6.65□□□□□ -1.34
CUL3-211ENST00000487558 CYP2A13Q16696 494 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 RABL3Q5HYI8 236 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 SP5Q6BEB4 398 aaPredicted RBP6.65□□□□□ -1.34
CUL3-211ENST00000487558 SLC44A2Q8IWA5 706 aaPredicted RBP6.65□□□□□ -1.34
CUL3-211ENST00000487558 FTSJ3Q8IY81 847 aaKnown RBP6.65□□□□□ -1.34
CUL3-211ENST00000487558 TMEM125Q96AQ2 219 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 RNF31Q96EP0 1072 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 TEX101Q9BY14 249 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 ALOXE3Q9BYJ1 711 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 KRTAP9-8Q9BYQ0 159 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 PABPC3Q9H361 631 aaKnown RBP6.65□□□□□ -1.34
CUL3-211ENST00000487558 EPS8L2Q9H6S3 715 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 GALNT9Q9HCQ5 603 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 SEPSECSQ9HD40 501 aaKnown RBP6.65□□□□□ -1.34
CUL3-211ENST00000487558 TMEM74BQ9NUR3 256 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 AURKAIP1Q9NWT8 199 aaPredicted RBP6.65□□□□□ -1.34
CUL3-211ENST00000487558 PDP2Q9P2J9 529 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 GJD2Q9UKL4 321 aa6.65□□□□□ -1.34
CUL3-211ENST00000487558 RRN3P2A6NIE6 340 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 GRXCR1A8MXD5 290 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 FAM155BO75949 473 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 HGFP14210 728 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 EPHA3P29320 983 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 UQCRC1P31930 480 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 SLC4A8Q2Y0W8 1093 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 ABLIM2Q6H8Q1 611 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 MBD3L2Q8NHZ7 208 aaPredicted RBP6.64□□□□□ -1.35
CUL3-211ENST00000487558 WDR60Q8WVS4 1066 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 ATRIPQ8WXE1 791 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 FAM136AQ96C01 138 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 ADOQ96SZ5 270 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 PYM1Q9BRP8 204 aaKnown RBP6.64□□□□□ -1.35
CUL3-211ENST00000487558 NUDT22Q9BRQ3 303 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 DDX23Q9BUQ8 820 aaKnown RBP6.64□□□□□ -1.35
CUL3-211ENST00000487558 INO80BQ9C086 356 aaPredicted RBP6.64□□□□□ -1.35
CUL3-211ENST00000487558 MLXIPQ9HAP2 919 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 PRDM8Q9NQV8 689 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 INTS13Q9NVM9 706 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 SERTAD3Q9UJW9 196 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 ING1Q9UK53 422 aaPredicted RBP6.64□□□□□ -1.35
CUL3-211ENST00000487558 USP22Q9UPT9 525 aa6.64□□□□□ -1.35
CUL3-211ENST00000487558 PNMA6EA0A0J9YXQ4 647 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 A0A1B0GVC2 190 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 PRRT4C9JH25 899 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 PCDH17O14917 1159 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 CSF1RP07333 972 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 ARP10275 920 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 GYS1P13807 737 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 ADD2P35612 726 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 PAPOLAP51003 745 aaKnown RBP6.63□□□□□ -1.35
CUL3-211ENST00000487558 SCAPQ12770 1279 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 EFR3AQ14156 821 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 GEN1Q17RS7 908 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 VPS53Q5VIR6 699 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 RINT1Q6NUQ1 792 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 ABRAQ8N0Z2 381 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 FAM109AQ8N4B1 249 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 NAXEQ8NCW5 288 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 OR1N1Q8NGS0 311 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 TMEM171Q8WVE6 324 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 OSCP1Q8WVF1 389 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 SDCCAG3Q96C92 435 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 MPP4Q96JB8 637 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 EIF2AK1Q9BQI3 630 aaKnown RBP6.63□□□□□ -1.35
CUL3-211ENST00000487558 TPSD1Q9BZJ3 242 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 AMBRA1Q9C0C7 1298 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 TAF1DQ9H5J8 278 aaPredicted RBP6.63□□□□□ -1.35
CUL3-211ENST00000487558 AKIP1Q9NQ31 210 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 SSX2IPQ9Y2D8 614 aa6.63□□□□□ -1.35
CUL3-211ENST00000487558 TRGV11A0A075B6L2 103 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 J3KTA2 159 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 NCR1O76036 304 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 ZFPL1O95159 310 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 GATA3P23771 443 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 ADORA2AP29274 412 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 AARSP49588 968 aaKnown RBP eCLIP6.62□□□□□ -1.35
CUL3-211ENST00000487558 MTHFSP49914 203 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 VAV2P52735 878 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 RESTQ13127 1097 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 FOXE3Q13461 319 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 MAPRE1Q15691 268 aaKnown RBP6.62□□□□□ -1.35
CUL3-211ENST00000487558 RINLQ6ZS11 566 aa6.62□□□□□ -1.35
CUL3-211ENST00000487558 RAB11FIP2Q7L804 512 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms