RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 DDX53Q86TM3 631 aaKnown RBP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 PSTKQ8IV42 348 aaKnown RBP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 OR10T2Q8NGX3 314 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 CCDC26Q8TAB7 109 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 TEKT4Q8WW24 435 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 RXFP2Q8WXD0 754 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 PIK3R5Q8WYR1 880 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 HERVK_113Q902F9 699 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 VWCEQ96DN2 955 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 BTBD6Q96KE9 485 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 PSMB7Q99436 277 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 SMOQ99835 787 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 ZBED2Q9BTP6 218 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 DDX23Q9BUQ8 820 aaKnown RBP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 GPR62Q9BZJ7 368 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 GOLPH3Q9H4A6 298 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 CWH43Q9H720 699 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 PRDM16Q9HAZ2 1276 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 RC3H2Q9HBD1 1191 aaKnown RBP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 POPDC2Q9HBU9 364 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 ARGLU1Q9NWB6 273 aaPredicted RBP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 CHORDC1Q9UHD1 332 aaPredicted RBP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 ZBBXA8MT70 800 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 ZNF487B1APH4 448 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 F8VP50 259 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 TULP2O00295 520 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 CLDN5O00501 218 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 CAPN9O14815 690 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 HCRTO43612 131 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 TBC1D4O60343 1298 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 TJP3O95049 919 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 GJB5O95377 273 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 EFEMP2O95967 443 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 FGGP02679 453 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 URODP06132 367 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 ACRP10323 421 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 CPB1P15086 417 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 IGFBP6P24592 240 aaPredicted RBP7.54□□□□□ -1.2
CCNB3-206ENST00000487204 GBP1P32455 592 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 TUFMP49411 452 aaKnown RBP7.54□□□□□ -1.2
CCNB3-206ENST00000487204 GLUD2P49448 558 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 GATMP50440 423 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 ZNF135P52742 658 aaPredicted RBP7.54□□□□□ -1.2
CCNB3-206ENST00000487204 DAOAP59103 153 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 RNASE9P60153 205 aaKnown RBP7.54□□□□□ -1.2
CCNB3-206ENST00000487204 HTRA4P83105 476 aaPredicted RBP7.54□□□□□ -1.2
CCNB3-206ENST00000487204 DSG1Q02413 1049 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 MTA1Q13330 715 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 PDK2Q15119 407 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 SLC25A52Q3SY17 297 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 TFDP3Q5H9I0 405 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 TEX35Q5T0J7 233 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 TPGS2Q68CL5 300 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 PM20D1Q6GTS8 502 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 SLC8B1Q6J4K2 584 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 ZNF365Q70YC5 407 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 OTOP2Q7RTS6 562 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 CCDC50Q8IVM0 306 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 RNF168Q8IYW5 571 aaPredicted RBP7.54□□□□□ -1.2
CCNB3-206ENST00000487204 SLC39A11Q8N1S5 342 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 FIBCD1Q8N539 461 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 COLGALT1Q8NBJ5 622 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 JOSD2Q8TAC2 188 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 CENPIQ92674 756 aaPredicted RBP7.54□□□□□ -1.2
CCNB3-206ENST00000487204 ALG3Q92685 438 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 BADQ92934 168 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 FAM149B1Q96BN6 582 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 SPATA17Q96L03 361 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 RAD9AQ99638 391 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 HERC2P3Q9BVR0 1158 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 FRMD8P1Q9BZ68 369 aaPredicted RBP7.54□□□□□ -1.2
CCNB3-206ENST00000487204 TRIM7Q9C029 511 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 SLITRK6Q9H5Y7 841 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 CHST7Q9NS84 486 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCNB3-206ENST00000487204 MTRRQ9UBK8 725 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 USP18Q9UMW8 372 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 USTQ9Y2C2 406 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 USP3Q9Y6I4 520 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 SLC4A7Q9Y6M7 1214 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 LTBP2Q14767 1821 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 MICAL3Q7RTP6 2002 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 HTTP42858 3142 aa7.54□□□□□ -1.2
CCNB3-206ENST00000487204 FAM170AA1A519 330 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 HHLA1C9JL84 531 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 F8W810 466 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 FSCN2O14926 492 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 MDM4O15151 490 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 LRCH4O75427 683 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 ERLIN1O75477 346 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 ZNF189O75820 626 aaPredicted RBP7.53□□□□□ -1.2
CCNB3-206ENST00000487204 BEST1O76090 585 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 ENDOD1O94919 500 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 TRUB2O95900 331 aaKnown RBP7.53□□□□□ -1.2
CCNB3-206ENST00000487204 LTFP02788 710 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 KRT1P04264 644 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 PYGMP11217 842 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 MIPP30301 263 aa7.53□□□□□ -1.2
CCNB3-206ENST00000487204 CHRNA3P32297 505 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms