RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 RENBPP51606 427 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 POLD3Q15054 466 aaPredicted RBP4.78□□□□□ -1.64
VPS41-213ENST00000485955 EZH2Q15910 746 aaKnown RBP4.78□□□□□ -1.64
VPS41-213ENST00000485955 ZNF750Q32MQ0 723 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 GFOD2Q3B7J2 385 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 LRCH2Q5VUJ6 765 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 ZNF425Q6IV72 752 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 CATSPERGQ6ZRH7 1159 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 BCDIN3DQ7Z5W3 292 aaKnown RBP4.78□□□□□ -1.64
VPS41-213ENST00000485955 NEK8Q86SG6 692 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 SIRT6Q8N6T7 355 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 C8orf58Q8NAV2 365 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 C5orf34Q96MH7 638 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 ASB2Q96Q27 587 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 ZNF287Q9HBT7 754 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 GOLGA6AQ9NYA3 693 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 MID2Q9UJV3 735 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 HDAC9Q9UKV0 1011 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 AMFRQ9UKV5 643 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 OGDHLQ9ULD0 1010 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 USP22Q9UPT9 525 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 PCDHGB6Q9Y5F9 930 aa4.78□□□□□ -1.64
VPS41-213ENST00000485955 POC1B-GALNT4F8VUJ3 575 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 F8W8V4 182 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 RAB27BO00194 218 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 CES2O00748 559 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 TP73O15350 636 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 CCP110O43303 1012 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 SPRY2O43597 315 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 TUBB4AP04350 444 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 TXNP10599 105 aaKnown RBP4.77□□□□□ -1.65
VPS41-213ENST00000485955 MYCLP12524 364 aaPredicted RBP4.77□□□□□ -1.65
VPS41-213ENST00000485955 RHCEP18577 417 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 CERS1P27544 350 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 TIRAPP58753 221 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 TIAL1Q01085 375 aaKnown RBP eCLIP4.77□□□□□ -1.65
VPS41-213ENST00000485955 RHDQ02161 417 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 ARHGEF7Q14155 803 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 SLC18B1Q6NT16 456 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 UNC13DQ70J99 1090 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 GALNT4Q8N4A0 578 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 TIFAQ96CG3 184 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 MMS19Q96T76 1030 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 APOL5Q9BWW9 433 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 VN1R3Q9BXE9 311 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 SEMA4CQ9C0C4 833 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 AS3MTQ9HBK9 375 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 PDGFCQ9NRA1 345 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 KLHL42Q9P2K6 505 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 DKK4Q9UBT3 224 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 BTBD3Q9Y2F9 522 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 PAXBP1Q9Y5B6 917 aa4.77□□□□□ -1.65
VPS41-213ENST00000485955 ZNF804BA4D1E1 1349 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 CACNA1IQ9P0X4 2223 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 PSMD9O00233 223 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 CYP2A6P11509 494 aaPredicted RBP4.76□□□□□ -1.65
VPS41-213ENST00000485955 BTF3P20290 206 aaKnown RBP4.76□□□□□ -1.65
VPS41-213ENST00000485955 EPHA3P29320 983 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 GATMP50440 423 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 FAM193AP78312 1265 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 LMAN2Q12907 356 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 SEMA5AQ13591 1074 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 KLF9Q13886 244 aaPredicted RBP4.76□□□□□ -1.65
VPS41-213ENST00000485955 SLC29A2Q14542 456 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 SLC2A7Q6PXP3 512 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 GLCCI1Q86VQ1 547 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 SFTPA1Q8IWL2 248 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 SCARB1Q8WTV0 552 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 WDYHV1Q96HA8 205 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 DHX36Q9H2U1 1008 aaKnown RBP4.76□□□□□ -1.65
VPS41-213ENST00000485955 ITGB1BP2Q9UKP3 347 aa4.76□□□□□ -1.65
VPS41-213ENST00000485955 SMIM35A0A1B0GVV1 85 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 EXOC5O00471 708 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 MGEA5O60502 916 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 PIAS2O75928 621 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 PARP1P09874 1014 aaKnown RBP4.75□□□□□ -1.65
VPS41-213ENST00000485955 ACVR2AP27037 513 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 NTSR1P30989 418 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 DIO1P49895 249 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 CPT1AP50416 773 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 PGDP52209 483 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 COPB1P53618 953 aaKnown RBP4.75□□□□□ -1.65
VPS41-213ENST00000485955 STK3Q13188 491 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 KCNAB1Q14722 419 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 AWAT1Q58HT5 328 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 PLAG1Q6DJT9 500 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 C11orf87Q6NUJ2 197 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 SERPINA13PQ6UXR4 307 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 PTCHD4Q6ZW05 846 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 RAB11FIP4Q86YS3 637 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 FMNL3Q8IVF7 1028 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 WDR75Q8IWA0 830 aaKnown RBP4.75□□□□□ -1.65
VPS41-213ENST00000485955 METTL25Q8N6Q8 603 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 C11orf44Q8N8P7 122 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 SMG7Q92540 1137 aaKnown RBP4.75□□□□□ -1.65
VPS41-213ENST00000485955 TFCP2L1Q9NZI6 479 aa4.75□□□□□ -1.65
VPS41-213ENST00000485955 WDR17Q8IZU2 1322 aa4.74□□□□□ -1.65
VPS41-213ENST00000485955 MT-ND5P03915 603 aa4.74□□□□□ -1.65
VPS41-213ENST00000485955 APEHP13798 732 aaKnown RBP4.74□□□□□ -1.65
VPS41-213ENST00000485955 CREB1P16220 341 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms