RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 CELSR3Q9NYQ7 3312 aa7.3□□□□□ -1.24
SMC4-217ENST00000485867 PTPRDP23468 1912 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 BCLAF3A2AJT9 711 aaKnown RBP7.29□□□□□ -1.24
SMC4-217ENST00000485867 SMCO2A6NFE2 343 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 SLC38A8A6NNN8 435 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 SH2B2O14492 632 aaPredicted RBP7.29□□□□□ -1.24
SMC4-217ENST00000485867 CDX4O14627 284 aaPredicted RBP7.29□□□□□ -1.24
SMC4-217ENST00000485867 ZNF263O14978 683 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 CHMP2AO43633 222 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 MAFO75444 373 aaPredicted RBP7.29□□□□□ -1.24
SMC4-217ENST00000485867 CAVIN2O95810 425 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 CALM1P0DP23 149 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 CALM2P0DP24 149 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 CALM3P0DP25 149 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 OR1D2P34982 312 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 VIPR2P41587 438 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 CCR2P41597 374 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 JAK3P52333 1124 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 PKN3Q6P5Z2 889 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 PDXDC1Q6P996 788 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 MFSD6LQ8IWD5 586 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 FAM13CQ8NE31 585 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 SMARCD2Q92925 531 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 CCDC51Q96ER9 411 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 MTA3Q9BTC8 594 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 GLT8D2Q9H1C3 349 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 UNC45AQ9H3U1 944 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 NXF3Q9H4D5 531 aaKnown RBP7.29□□□□□ -1.24
SMC4-217ENST00000485867 C8orf33Q9H7E9 229 aaPredicted RBP7.29□□□□□ -1.24
SMC4-217ENST00000485867 SP110Q9HB58 689 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 ZMYM2Q9UBW7 1377 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 ZNF462Q96JM2 2506 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 ADAMTS9Q9P2N4 1935 aa7.29□□□□□ -1.24
SMC4-217ENST00000485867 GOLGA4Q13439 2230 aaKnown RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 PTPRBP23467 1997 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 ARHGEF37A1IGU5 675 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 MYBPHLA2RUH7 354 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 FAM221BA6H8Z2 402 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 CCDC69A6NI79 296 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 EIF4E1BA6NMX2 242 aaKnown RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 SPECC1L-ADORA2AF8WAN1 911 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 hCG_1984214I3L0E3 225 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 ADAMTS3O15072 1205 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 PRC1O43663 620 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 TSPAN1O60635 241 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 GAS7O60861 476 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 MOSPD3O75425 235 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 ERLIN2O94905 339 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 PTPN2P17706 415 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 SFNP31947 248 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 CIITAP33076 1130 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 KPNA1P52294 538 aaPredicted RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 YARSP54577 528 aaKnown RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 CREB5Q02930 508 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 PTH1RQ03431 593 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 ELAVL2Q12926 359 aaKnown RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 CAMK2GQ13555 558 aaPredicted RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 PON2Q15165 354 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 ELF2Q15723 593 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 PLA2G4FQ68DD2 849 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 NOTUMQ6P988 496 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 CASC1Q6TDU7 716 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 LCNL1Q6ZST4 164 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 TSPYL5Q86VY4 417 aaPredicted RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 RALGPS2Q86X27 583 aaPredicted RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 MICU3Q86XE3 530 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 LRRC56Q8IYG6 542 aaPredicted RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 SLFN12Q8IYM2 578 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 SYNPOQ8N3V7 929 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 ZNF713Q8N859 430 aaPredicted RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 CSGALNACT1Q8TDX6 532 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 GATAD2BQ8WXI9 593 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 RSPRY1Q96DX4 576 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 CPB2Q96IY4 423 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 ZSWIM3Q96MP5 696 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 JPH2Q9BR39 696 aaPredicted RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 CSRNP2Q9H175 543 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 EPB41L4BQ9H329 900 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 TRPV4Q9HBA0 871 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 GPATCH2Q9NW75 528 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 BARHL2Q9NY43 387 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 MTRRQ9UBK8 725 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 DUSP13Q9UII6 198 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 HECTD1Q9ULT8 2610 aa7.28□□□□□ -1.24
SMC4-217ENST00000485867 ZNF638Q14966 1978 aaKnown RBP7.28□□□□□ -1.24
SMC4-217ENST00000485867 SPAARA0A1B0GVQ0 90 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 CASTOR2A6NHX0 329 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 HEPACAM2A8MVW5 462 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 ZNF197O14709 1029 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 CHADO15335 359 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 MSH4O15457 936 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 F13A1P00488 732 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 LRG1P02750 347 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 PF4P02776 101 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 SRGAP2CP0DJJ0 459 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 AKAP5P24588 427 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 AXLP30530 894 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 LIFRP42702 1097 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 SPIRE1Q08AE8 756 aa7.27□□□□□ -1.25
SMC4-217ENST00000485867 LAMTOR4Q0VGL1 99 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms