RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 SYNJ1O43426 1573 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 MAP3K1Q13233 1512 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 PRXQ9BXM0 1461 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SPAG9O60271 1321 aaKnown RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 MYPNQ86TC9 1320 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 GPR75-ASB3A0A0A6YYF3 556 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 PI4KAP2A4QPH2 592 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 PRAMEF25A6NGN4 478 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 AP3D1O14617 1153 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 PRPSAP2O60256 369 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 RANBP6O60518 1105 aaKnown RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 PSPNO60542 156 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 TRIM13O60858 407 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 KERAO60938 352 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SEC22BO75396 215 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SLC22A3O75751 556 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SOAT2O75908 522 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 RTN3O95197 1032 aaPredicted RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 PRLP01236 227 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 ALOX15P16050 662 aaPredicted RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 PI3P19957 117 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 MCM5P33992 734 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SOX6P35712 828 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 MCAMP43121 646 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 POLD2P49005 469 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 MAP2K6P52564 334 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 TUBA1BP68363 451 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 CTAG1AP78358 180 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 CCNA1P78396 465 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 DSC2Q02487 901 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 GBE1Q04446 702 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 KRT17Q04695 432 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 RUNX1T1Q06455 604 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 LRMPQ12912 555 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 TRIM25Q14258 630 aaKnown RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 NEDD9Q14511 834 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 RCN1Q15293 331 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 CLPPQ16740 277 aaPredicted RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 TMEM266Q2M3C6 531 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 ZNF674Q2M3X9 581 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SUPT20HL1Q3ZLR7 823 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 ZNF362Q5T0B9 420 aaPredicted RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 METTL11BQ5VVY1 283 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 NAA16Q6N069 864 aaPredicted RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 IL27RAQ6UWB1 636 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 ZPBP2Q6X784 338 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 TUBA1AQ71U36 451 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 MIGA2Q7L4E1 593 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 DGLUCYQ7Z3D6 616 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SLCO6A1Q86UG4 719 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 NLRX1Q86UT6 975 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SPATA24Q86W54 205 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 PDCL2Q8N4E4 241 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 TCP11L2Q8N4U5 519 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 C10orf53Q8N6V4 93 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SUPT20HQ8NEM7 779 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 OR6C4Q8NGE1 309 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 OR52K1Q8NGK4 314 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 PLBD2Q8NHP8 589 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 NRG4Q8WWG1 115 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SEC14L1Q92503 715 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 RAPGEF5Q92565 580 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 RGMAQ96B86 450 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 MTFMTQ96DP5 389 aaKnown RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 RRP36Q96EU6 259 aaKnown RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 MSLNLQ96KJ4 702 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 JMJD8Q96S16 334 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 UQCC2Q9BRT2 126 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 ZPBPQ9BS86 351 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 TMEM120AQ9BXJ8 343 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 GREM2Q9H772 168 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 PREBQ9HCU5 417 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 PNPLA8Q9NP80 782 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 USP40Q9NVE5 1235 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 IL1RAPL1Q9NZN1 696 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 MYOTQ9UBF9 498 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 HECAQ9UBI9 543 aaPredicted RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 ADD3Q9UEY8 706 aaKnown RBP4.82□□□□□ -1.64
RTN4-213ENST00000485749 TEKT2Q9UIF3 430 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 SUFUQ9UMX1 484 aa4.82□□□□□ -1.64
RTN4-213ENST00000485749 ARAP1Q96P48 1450 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 SETD5Q9C0A6 1442 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 GAKO14976 1311 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 A0A1W2PPL8 197 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 FAM171A2A8MVW0 826 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 KPNA5O15131 536 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 FFAR2O15552 330 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 MTSS1O43312 755 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 IL18RAPO95256 599 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 PGM3O95394 542 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 BAG4O95429 457 aaKnown RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 FTLP02792 175 aaPredicted RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 MPOP05164 745 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 ITGB1P05556 798 aa4.81□□□□□ -1.64
RTN4-213ENST00000485749 S100A9P06702 114 aaKnown RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 SNRNP70P08621 437 aaKnown RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 SNRPA1P09661 255 aaKnown RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 DLATP10515 647 aaKnown RBP4.81□□□□□ -1.64
RTN4-213ENST00000485749 CSF2RAP15509 400 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms