RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 GPR158Q5T848 1215 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 CLEC20AQ6ZU45 233 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 PIGZQ86VD9 579 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 DDX42Q86XP3 938 aaKnown RBP eCLIP8.71□□□□□ -1.02
SF3A1-208ENST00000485618 ZDHHC17Q8IUH5 632 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 TTC9BQ8N6N2 239 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 UBA3Q8TBC4 463 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 GPR152Q8TDT2 470 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 IPO4Q8TEX9 1081 aaKnown RBP8.71□□□□□ -1.02
SF3A1-208ENST00000485618 IRGQQ8WZA9 623 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 FGF13Q92913 245 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 KCNK16Q96T55 309 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 SMOQ99835 787 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 TTLL2Q9BWV7 592 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 GANQ9H2C0 597 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 ZFP14Q9HCL3 533 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 CNGB3Q9NQW8 809 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 ST7Q9NRC1 585 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 HCFC1R1Q9NWW0 138 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 THG1LQ9NWX6 298 aaKnown RBP8.71□□□□□ -1.02
SF3A1-208ENST00000485618 EPS15L1Q9UBC2 864 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 NME7Q9Y5B8 376 aa8.71□□□□□ -1.02
SF3A1-208ENST00000485618 A0A1W2PRU2 124 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 ZNF840PA6NDX5 716 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 TNFRSF10BO14763 440 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 ZBED1O96006 694 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 CKMP06732 381 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 USP17L7P0C7H9 530 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 HMGA1P17096 107 aaKnown RBP8.7□□□□□ -1.02
SF3A1-208ENST00000485618 HDCP19113 662 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 TNFAIP3P21580 790 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 AVPR2P30518 371 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 CLCN1P35523 988 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 KLK7P49862 253 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 TUBP50607 506 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 TKTL1P51854 596 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 CDR1P51861 262 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 KPNA1P52294 538 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-208ENST00000485618 KIF11P52732 1056 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 APBA1Q02410 837 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 PDE4CQ08493 712 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 KLHL30Q0D2K2 578 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 IFRD2Q12894 506 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-208ENST00000485618 SDHAF4Q5VUM1 108 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 CC2D1AQ6P1N0 951 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-208ENST00000485618 RSRC2Q7L4I2 434 aaKnown RBP8.7□□□□□ -1.02
SF3A1-208ENST00000485618 CCDC186Q7Z3E2 898 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 SLC47A2Q86VL8 602 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 ERICH1Q86X53 443 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 CNGA4Q8IV77 575 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 YAF2Q8IY57 180 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 DRC7Q8IY82 874 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 HS6ST3Q8IZP7 471 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 KIAA1958Q8N8K9 716 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 SCAMP5Q8TAC9 235 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 ITFG1Q8TB96 612 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 RNF139Q8WU17 664 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 SLC35F5Q8WV83 523 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 TFAP2BQ92481 460 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 ATOH1Q92858 354 aaPredicted RBP8.7□□□□□ -1.02
SF3A1-208ENST00000485618 SMARCD2Q92925 531 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 SECISBP2LQ93073 1101 aaKnown RBP8.7□□□□□ -1.02
SF3A1-208ENST00000485618 MCRS1Q96EZ8 462 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 IRF2BPLQ9H1B7 796 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 RBSNQ9H1K0 784 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 OLA1Q9NTK5 396 aaKnown RBP8.7□□□□□ -1.02
SF3A1-208ENST00000485618 SEPT11Q9NVA2 429 aaKnown RBP8.7□□□□□ -1.02
SF3A1-208ENST00000485618 OBP2AQ9NY56 170 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 CLIC5Q9NZA1 410 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 IL37Q9NZH6 218 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 AIPL1Q9NZN9 384 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 CDH22Q9UJ99 828 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 STRIP2Q9ULQ0 834 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 CAPN11Q9UMQ6 739 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 PLXNA3P51805 1871 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 MYH10P35580 1976 aa8.7□□□□□ -1.02
SF3A1-208ENST00000485618 TSC2P49815 1807 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 FAM92AA1XBS5 289 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 H0Y858 1186 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 PDGFBP01127 241 aaPredicted RBP8.69□□□□□ -1.02
SF3A1-208ENST00000485618 F11P03951 625 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 GLI1P08151 1106 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 GPD2P43304 727 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 NSFP46459 744 aaKnown RBP8.69□□□□□ -1.02
SF3A1-208ENST00000485618 GPR15P49685 360 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 NTHL1P78549 312 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 AMPD2Q01433 879 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 PFKPQ01813 784 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 MTMR3Q13615 1198 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 ZNF268Q14587 947 aaPredicted RBP8.69□□□□□ -1.02
SF3A1-208ENST00000485618 TEAD2Q15562 447 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 RAB41Q5JT25 222 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 EFHC1Q5JVL4 640 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 PRSS36Q5K4E3 855 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 SNX30Q5VWJ9 437 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 BTBD8Q5XKL5 378 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 PM20D1Q6GTS8 502 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 DPY19L2P1Q6NXN4 242 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 KLHDC10Q6PID8 442 aa8.69□□□□□ -1.02
SF3A1-208ENST00000485618 TOGARAM2Q6ZUX3 1019 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms