RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 EFHBQ8N7U6 833 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 OR2W6PQ8NHA6 318 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 SHC3Q92529 594 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 TMEM175Q9BSA9 504 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 LRRC3Q9BY71 257 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 TMEM117Q9H0C3 514 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 CWH43Q9H720 699 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 C11orf16Q9NQ32 467 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 RAB6BQ9NRW1 208 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 LRFN1Q9P244 771 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 TRIM38O00635 465 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 CASQ2O14958 399 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 RIPK2O43353 540 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 NPTXRO95502 500 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 NEFHP12036 1026 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 FDPSP14324 419 aaKnown RBP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 CTSSP25774 331 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 PSMC5P62195 406 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 NRG1Q02297 640 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 ERV3-1Q14264 604 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 C4orf48Q5BLP8 95 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 WDR73Q6P4I2 378 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 TMEM102Q8N9M5 508 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 RBBP8NLQ8NC74 664 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 KLHL6Q8WZ60 621 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 HSD17B14Q9BPX1 270 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 FTOQ9C0B1 505 aaKnown RBP eCLIP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 CHRDQ9H2X0 955 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 FOXP1Q9H334 677 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 PRDM12Q9H4Q4 367 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 TUFT1Q9NNX1 390 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 SH2B1Q9NRF2 756 aaPredicted RBP5.64□□□□□ -1.51
CCDC39-205ENST00000485055 KRT84Q9NSB2 600 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 UBAP1Q9NZ09 502 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 TELO2Q9Y4R8 837 aa5.64□□□□□ -1.51
CCDC39-205ENST00000485055 SYNJ2BP-COX16A0A087WUM0 186 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 A0A0U1RQF3 1178 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 KRBA1A5PL33 1030 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 ZSCAN5CA6NGD5 496 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 K7ESF4 209 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 M0QX08 132 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 M0QZ92 97 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 AP3B1O00203 1094 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 LAD1O00515 517 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 BACH1O14867 736 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 ZNF862O60290 1169 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 EPN2O95208 641 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 DARSP14868 501 aaKnown RBP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 TMEM11P17152 192 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 HDCP19113 662 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 KLRC1P26715 233 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 DPP6P42658 865 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 GPC3P51654 580 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 PSMA6P60900 246 aaKnown RBP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 AP2B1P63010 937 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 SCRN1Q12765 414 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 SV2CQ496J9 727 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 PREPLQ4J6C6 727 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 MCTP1Q6DN14 999 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 GPR139Q6DWJ6 353 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 TXNDC11Q6PKC3 985 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 ZNF438Q7Z4V0 828 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 FIBCD1Q8N539 461 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 KLHL23Q8NBE8 558 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 CYP2W1Q8TAV3 490 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 TCP11Q8WWU5 503 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 SUSD6Q92537 303 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 HAS1Q92839 578 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 KHSRPQ92945 711 aaKnown RBP eCLIP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 SPATA17Q96L03 361 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 COG8Q96MW5 612 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 CASD1Q96PB1 797 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 RBM14Q96PK6 669 aaKnown RBP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 TIPINQ9BVW5 301 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 C1QTNF1Q9BXJ1 281 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 AKAP7Q9P0M2 348 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 PCOLCE2Q9UKZ9 415 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 PADI3Q9ULW8 664 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 HPCAL4Q9UM19 191 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 COL4A2P08572 1712 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 CACNB4O00305 520 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 ADAMTS3O15072 1205 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 CCP110O43303 1012 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 RNF40O75150 1001 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 ADCY5O95622 1261 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 GAP43P17677 238 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 LAG3P18627 525 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 U2AF2P26368 475 aaKnown RBP eCLIP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 ATP5OP48047 213 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 CASP5P51878 434 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 RABGGTBP53611 331 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 SP140Q13342 867 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 CAMK1Q14012 370 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 PDIA5Q14554 519 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 ATAT1Q5SQI0 421 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 IL27RAQ6UWB1 636 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 USP51Q70EK9 711 aa5.63□□□□□ -1.51
CCDC39-205ENST00000485055 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-205ENST00000485055 DEFB128Q7Z7B8 93 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms