RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 EPHB4P54760 987 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 NHLH2Q02577 135 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 HHEXQ03014 270 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 MYO1EQ12965 1108 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 GPS1Q13098 491 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 PKN1Q16512 942 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 TRIM71Q2Q1W2 868 aaKnown RBP5.03□□□□□ -1.6
XPA-203ENST00000485042 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 DCAF17Q5H9S7 520 aaPredicted RBP5.03□□□□□ -1.6
XPA-203ENST00000485042 MANEALQ5VSG8 457 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 LRRTM4Q86VH4 590 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 TICAM2Q86XR7 235 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 RHOT2Q8IXI1 618 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 COLGALT2Q8IYK4 626 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 ANKRD35Q8N283 1001 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 OR56A1Q8NGH5 318 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 OR1N1Q8NGS0 311 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 POC1BQ8TC44 478 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 LRIG1Q96JA1 1093 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 PTDSS2Q9BVG9 487 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 MEGF9Q9H1U4 602 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 PABPC3Q9H361 631 aaKnown RBP5.03□□□□□ -1.6
XPA-203ENST00000485042 RNPEPQ9H4A4 650 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 GGA3Q9NZ52 723 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 VSX1Q9NZR4 365 aaPredicted RBP5.03□□□□□ -1.6
XPA-203ENST00000485042 LPAR3Q9UBY5 353 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 USP15Q9Y4E8 981 aaPredicted RBP5.03□□□□□ -1.6
XPA-203ENST00000485042 EEA1Q15075 1411 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 PTPRKQ15262 1439 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 PLXNC1O60486 1568 aa5.03□□□□□ -1.6
XPA-203ENST00000485042 ZNF536O15090 1300 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 PLA2R1Q13018 1463 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 A0A1B0GTW7 788 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 B9A039 149 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 LEFTY2O00292 366 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 PCDH17O14917 1159 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 NTSR2O95665 410 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 GPANK1O95872 356 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 KCNA3P22001 575 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 AKT1P31749 480 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 CASP2P42575 452 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 PNLIPRP1P54315 467 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 HSD11B2P80365 405 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 SCAPQ12770 1279 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 FOXD4Q12950 439 aaPredicted RBP5.02□□□□□ -1.61
XPA-203ENST00000485042 CUL4BQ13620 913 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 FAM110CQ1W6H9 321 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 PTCHD3Q3KNS1 767 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 PREPLQ4J6C6 727 aaPredicted RBP5.02□□□□□ -1.61
XPA-203ENST00000485042 AGAP9Q5VTM2 703 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 RETSATQ6NUM9 610 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 SGMS1Q86VZ5 419 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 SLC44A2Q8IWA5 706 aaPredicted RBP5.02□□□□□ -1.61
XPA-203ENST00000485042 NRSN1Q8IZ57 195 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 ESX1Q8N693 406 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 SCAMP5Q8TAC9 235 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 DNAJB14Q8TBM8 379 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 CPT1CQ8TCG5 803 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 ASB12Q8WXK4 309 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 MIEF2Q96C03 454 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 FAM227BQ96M60 508 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 TRAPPC9Q96Q05 1148 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 MED15Q96RN5 788 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 ZSWIM1Q9BR11 485 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 SLC26A6Q9BXS9 759 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 TP63Q9H3D4 680 aaPredicted RBP5.02□□□□□ -1.61
XPA-203ENST00000485042 PRDM8Q9NQV8 689 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 HSFX1Q9UBD0 423 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 FEM1BQ9UK73 627 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 VWDEQ8N2E2 1590 aa5.02□□□□□ -1.61
XPA-203ENST00000485042 A2MP01023 1474 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 SHANK2Q9UPX8 1470 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 SPAG9O60271 1321 aaKnown RBP5.01□□□□□ -1.61
XPA-203ENST00000485042 J3KTA2 159 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 ZSCAN9O15535 394 aaPredicted RBP5.01□□□□□ -1.61
XPA-203ENST00000485042 TOM1O60784 492 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 RAD17O75943 681 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 FAM155BO75949 473 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 MBD4O95243 580 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 ANXA6P08133 673 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 ARP10275 920 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 KCNA2P16389 499 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 FGFR4P22455 802 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 YY1P25490 414 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 PRKAR1BP31321 381 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 SLC5A2P31639 672 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 APOBEC3AP31941 199 aaPredicted RBP5.01□□□□□ -1.61
XPA-203ENST00000485042 KRT9P35527 623 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 AARSP49588 968 aaKnown RBP eCLIP5.01□□□□□ -1.61
XPA-203ENST00000485042 PRKAA2P54646 552 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 RNASE9P60153 205 aaKnown RBP5.01□□□□□ -1.61
XPA-203ENST00000485042 MC2RQ01718 297 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 ATP1A4Q13733 1029 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 E2F2Q14209 437 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 FAM102AQ5T9C2 384 aaPredicted RBP5.01□□□□□ -1.61
XPA-203ENST00000485042 ARHGAP40Q5TG30 622 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 METRNLQ641Q3 311 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 RINT1Q6NUQ1 792 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 RRAGAQ7L523 313 aa5.01□□□□□ -1.61
XPA-203ENST00000485042 TTC30AQ86WT1 665 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms