RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 ZDHHC17Q8IUH5 632 aa5.39□□□□□ -1.55
SCAF11-207ENST00000484275 TPH2Q8IWU9 490 aa5.39□□□□□ -1.55
SCAF11-207ENST00000484275 OR56A3Q8NH54 315 aa5.39□□□□□ -1.55
SCAF11-207ENST00000484275 OSR1Q8TAX0 266 aaPredicted RBP5.39□□□□□ -1.55
SCAF11-207ENST00000484275 SLC35G2Q8TBE7 412 aa5.39□□□□□ -1.55
SCAF11-207ENST00000484275 WDYHV1Q96HA8 205 aa5.39□□□□□ -1.55
SCAF11-207ENST00000484275 LRGUKQ96M69 825 aa5.39□□□□□ -1.55
SCAF11-207ENST00000484275 TAAR9Q96RI9 348 aa5.39□□□□□ -1.55
SCAF11-207ENST00000484275 SIGLEC11Q96RL6 698 aa5.39□□□□□ -1.55
SCAF11-207ENST00000484275 CDY1Q9Y6F8 540 aa5.39□□□□□ -1.55
SCAF11-207ENST00000484275 ALDH1L1O75891 902 aa5.38□□□□□ -1.55
SCAF11-207ENST00000484275 CT47B1P0C2W7 299 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-207ENST00000484275 CYP19A1P11511 503 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-207ENST00000484275 EN2P19622 333 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-207ENST00000484275 TKTP29401 623 aaKnown RBP5.38□□□□□ -1.55
SCAF11-207ENST00000484275 THBS4P35443 961 aa5.38□□□□□ -1.55
SCAF11-207ENST00000484275 SUMO2P61956 95 aaKnown RBP5.38□□□□□ -1.55
SCAF11-207ENST00000484275 PTPROQ16827 1216 aa5.38□□□□□ -1.55
SCAF11-207ENST00000484275 SWSAP1Q6NVH7 229 aa5.38□□□□□ -1.55
SCAF11-207ENST00000484275 IL31RAQ8NI17 732 aa5.38□□□□□ -1.55
SCAF11-207ENST00000484275 ZCRB1Q8TBF4 217 aaKnown RBP5.38□□□□□ -1.55
SCAF11-207ENST00000484275 JPH3Q8WXH2 748 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-207ENST00000484275 AIFM3Q96NN9 605 aa5.38□□□□□ -1.55
SCAF11-207ENST00000484275 TMEM184CQ9NVA4 438 aa5.38□□□□□ -1.55
SCAF11-207ENST00000484275 DNMT3BQ9UBC3 853 aaKnown RBP5.38□□□□□ -1.55
SCAF11-207ENST00000484275 PNMA8BQ9ULN7 279 aaPredicted RBP5.38□□□□□ -1.55
SCAF11-207ENST00000484275 LRP12Q9Y561 859 aa5.38□□□□□ -1.55
SCAF11-207ENST00000484275 MYMKA6NI61 221 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 PSMD9O00233 223 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 TBX3O15119 743 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 TBC1D4O60343 1298 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 SRGAP2O75044 1071 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 UQCRC1P31930 480 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 ZNF91Q05481 1191 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 PIN1Q13526 163 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-207ENST00000484275 LARS2Q15031 903 aaKnown RBP5.37□□□□□ -1.55
SCAF11-207ENST00000484275 LEXMQ3ZCV2 418 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 OVCH2Q7RTZ1 564 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 LIX1LQ8IVB5 337 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 SPARTQ8N0X7 666 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 ZBTB34Q8NCN2 500 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 MAFAQ8NHW3 353 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-207ENST00000484275 ZBTB45Q96K62 511 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-207ENST00000484275 TRIM5Q9C035 493 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 NMRK2Q9NPI5 230 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 XPNPEP3Q9NQH7 507 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 ZSCAN32Q9NX65 697 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 STK32BQ9NY57 414 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 USP19O94966 1318 aa5.37□□□□□ -1.55
SCAF11-207ENST00000484275 H3BNC9 293 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 CFHR1Q03591 330 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 RAB32Q13637 225 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 TTF1Q15361 905 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-207ENST00000484275 ANO6Q4KMQ2 910 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 TMTC4Q5T4D3 741 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 NPNTQ6UXI9 565 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 EPM2AIP1Q7L775 607 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-207ENST00000484275 MICU3Q86XE3 530 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 STAG1Q8WVM7 1258 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 CUL5Q93034 780 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 VN1R3Q9BXE9 311 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 BRINP2Q9C0B6 783 aa5.36□□□□□ -1.55
SCAF11-207ENST00000484275 FOXP1Q9H334 677 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-207ENST00000484275 M0R3H8 397 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 AGPSO00116 658 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 PHGDHO43175 533 aaKnown RBP5.35□□□□□ -1.55
SCAF11-207ENST00000484275 AKAP10O43572 662 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 TUSC2O75896 110 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 TMEM191BP0C7N4 346 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 CREB1P16220 341 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 HSPA6P17066 643 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 CCKARP32238 428 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 RAB27AP51159 221 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 TIRAPP58753 221 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 TIAL1Q01085 375 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCAF11-207ENST00000484275 SRSF1Q07955 248 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCAF11-207ENST00000484275 TWIST1Q15672 202 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 TMEM65Q6PI78 240 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 RANBP10Q6VN20 620 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 RAB11FIP4Q86YS3 637 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 NSMCE1Q8WV22 266 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 B3GNT5Q9BYG0 378 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 ZNF518BQ9C0D4 1074 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 A1CFQ9NQ94 594 aaKnown RBP5.35□□□□□ -1.55
SCAF11-207ENST00000484275 HEY2Q9UBP5 337 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 ZNF180Q9UJW8 692 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 USP22Q9UPT9 525 aa5.35□□□□□ -1.55
SCAF11-207ENST00000484275 CCDC187A0A096LP49 1063 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 H7C4K7 107 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 CD3EAPO15446 510 aaKnown RBP5.34□□□□□ -1.55
SCAF11-207ENST00000484275 TLR2O60603 784 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 RASAL1O95294 804 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 PHKG2P15735 406 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 EPHA3P29320 983 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 SLC7A1P30825 629 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 PRKAR1BP31321 381 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 GPR162Q16538 588 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 CACHD1Q5VU97 1274 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 DEF8Q6ZN54 512 aa5.34□□□□□ -1.55
SCAF11-207ENST00000484275 DCDC5Q6ZRR9 648 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms