RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-208ENST00000484254 CCDC105Q8IYK2 499 aa23.38■■□□□ 1.33
CNTNAP3B-208ENST00000484254 MSANTD3Q96H12 275 aa23.38■■□□□ 1.33
CNTNAP3B-208ENST00000484254 C8orf33Q9H7E9 229 aaPredicted RBP23.38■■□□□ 1.33
CNTNAP3B-208ENST00000484254 UBE2TQ9NPD8 197 aaPredicted RBP23.38■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TLR8Q9NR97 1041 aaKnown RBP23.38■■□□□ 1.33
CNTNAP3B-208ENST00000484254 SAMSN1Q9NSI8 373 aaKnown RBP23.38■■□□□ 1.33
CNTNAP3B-208ENST00000484254 GTSE1Q9NYZ3 720 aa23.38■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TSPAN16Q9UKR8 245 aa23.38■■□□□ 1.33
CNTNAP3B-208ENST00000484254 MTF2Q9Y483 593 aaPredicted RBP23.38■■□□□ 1.33
CNTNAP3B-208ENST00000484254 NFE2L3Q9Y4A8 694 aa23.38■■□□□ 1.33
CNTNAP3B-208ENST00000484254 RNF225M0QZC1 329 aaPredicted RBP23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 DCNP07585 359 aaKnown RBP23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 SLC9A1P19634 815 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 KPNA1P52294 538 aaPredicted RBP23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 SLC8A3P57103 927 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TNK2Q07912 1038 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 PDGFRLQ15198 375 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 ITPRIPL2Q3MIP1 535 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 HSP90AA4PQ58FG1 418 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TTC30AQ86WT1 665 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 DTWD2Q8NBA8 298 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 RBBP8NLQ8NC74 664 aaPredicted RBP23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TUBGCP2Q9BSJ2 902 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 ANO10Q9NW15 660 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 DLGAP2Q9P1A6 1054 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 CNTN6Q9UQ52 1028 aa23.37■■□□□ 1.33
CNTNAP3B-208ENST00000484254 KCNJ18B7U540 433 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 LEFTY2O00292 366 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 O00370 1275 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 COCHO43405 550 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TARSP26639 723 aaKnown RBP23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 PGFP49763 221 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 ZNF132P52740 706 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 BCAT1P54687 386 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 ZXDBP98169 803 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 KCNJ12Q14500 433 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 STX1AQ16623 288 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 EXOC3L4Q17RC7 722 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 VWA3BQ502W6 1294 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 C1orf228Q6PIY5 440 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 ENOSF1Q7L5Y1 443 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 PIGZQ86VD9 579 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 RALGPS2Q86X27 583 aaPredicted RBP23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TTC16Q8NEE8 873 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TTC8Q8TAM2 541 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TFAP2BQ92481 460 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 FAM3CQ92520 227 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 FAM81BQ96LP2 452 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 NDST4Q9H3R1 872 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 CCSER2Q9H7U1 834 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 HPS4Q9NQG7 708 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TMEM63CQ9P1W3 806 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 HESX1Q9UBX0 185 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 CPQQ9Y646 472 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 USP3Q9Y6I4 520 aa23.36■■□□□ 1.33
CNTNAP3B-208ENST00000484254 MUC6Q6W4X9 2439 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 CYP26A1O43174 497 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 MBL2P11226 248 aaPredicted RBP23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 PRKCSHP14314 528 aaPredicted RBP23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 EEF1GP26641 437 aaKnown RBP23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 PON1P27169 355 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 SOX9P48436 509 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 MFAP3P55082 362 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 RUNX3Q13761 415 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TCP11X2Q5H9J9 407 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 RAB41Q5JT25 222 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 MIIPQ5JXC2 388 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TRIM68Q6AZZ1 485 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 LCLAT1Q6UWP7 414 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 CCDC186Q7Z3E2 898 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 ZNF687Q8N1G0 1237 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 KIAA1958Q8N8K9 716 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 OSCP1Q8WVF1 389 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 EBF3Q9H4W6 596 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 DUS2Q9NX74 493 aaKnown RBP23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 SMPD4Q9NXE4 827 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 APEX2Q9UBZ4 518 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 MIA3Q5JRA6 1907 aa23.35■■□□□ 1.33
CNTNAP3B-208ENST00000484254 MYO16Q9Y6X6 1858 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 SPECC1L-ADORA2AF8WAN1 911 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 XPO1O14980 1071 aaKnown RBP23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 NCAM2O15394 837 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 CTHP32929 405 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 PTPN5P54829 565 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 PDE4CQ08493 712 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 BST2Q10589 180 aaKnown RBP23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TCF15Q12870 199 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 STILQ15468 1287 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 C11orf57Q6ZUT1 292 aaPredicted RBP23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 DDX42Q86XP3 938 aaKnown RBP eCLIP23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 CLDN23Q96B33 292 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 ZSWIM1Q9BR11 485 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 NDRG2Q9UN36 371 aaKnown RBP23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 WNT6Q9Y6F9 365 aa23.34■■□□□ 1.33
CNTNAP3B-208ENST00000484254 TLR5O60602 858 aa23.33■■□□□ 1.33
CNTNAP3B-208ENST00000484254 SETSIPP0DME0 302 aa23.33■■□□□ 1.33
CNTNAP3B-208ENST00000484254 ARSAP15289 507 aa23.33■■□□□ 1.33
CNTNAP3B-208ENST00000484254 IFNAR2P48551 515 aa23.33■■□□□ 1.33
CNTNAP3B-208ENST00000484254 FZD5Q13467 585 aa23.33■■□□□ 1.33
CNTNAP3B-208ENST00000484254 CNGA2Q16280 664 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms