RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 SDCBP2Q9H190 292 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 EPC1Q9H2F5 836 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 LRRC19Q9H756 370 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 ERVK-5Q9HDB9 667 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 GDF3Q9NR23 364 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 RBM12Q9NTZ6 932 aaKnown RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 FAM105AQ9NUU6 356 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 ZNF446Q9NWS9 450 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 PARP2Q9UGN5 583 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 PCYOX1Q9UHG3 505 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 ANAPC7Q9UJX3 599 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 POLIQ9UNA4 740 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 PACSIN2Q9UNF0 486 aaPredicted RBP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.71□□□□□ -1.5
COL17A1-206ENST00000483876 EFR3BQ9Y2G0 817 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 ANK1P16157 1881 aa5.71□□□□□ -1.5
COL17A1-206ENST00000483876 FRYQ5TBA9 3013 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 SMG1Q96Q15 3661 aaKnown RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 TMEM8BA6NDV4 472 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 FAM187AA6NFU0 413 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 PODXLO00592 558 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 GABRDO14764 452 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 HUS1O60921 280 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 THP07101 528 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 PYGMP11217 842 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 KRT3P12035 628 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 CD19P15391 556 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 WARSP23381 471 aaKnown RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 AKAP5P24588 427 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 BRD2P25440 801 aaKnown RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 PTPN7P35236 360 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 GNL1P36915 607 aaPredicted RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 THPOP40225 353 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 LILRA4P59901 499 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 C2orf54Q08AI8 447 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 DHX34Q14147 1143 aaKnown RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 SOWAHAQ2M3V2 549 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 ZNF394Q53GI3 561 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 SEL1L2Q5TEA6 688 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 DCAF12L1Q5VU92 463 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 DENND1BQ6P3S1 775 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 DCUN1D2Q6PH85 259 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 SYDE1Q6ZW31 735 aaPredicted RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 POLNQ7Z5Q5 900 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 SLC13A5Q86YT5 568 aaPredicted RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 C12orf50Q8NA57 414 aaPredicted RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 ANKRD52Q8NB46 1076 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 C1orf131Q8NDD1 294 aaKnown RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 GSTCDQ8NEC7 633 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 APPL2Q8NEU8 664 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 NETO1Q8TDF5 533 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 SLC35F5Q8WV83 523 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 RSPH1Q8WYR4 309 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 ELMO3Q96BJ8 720 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 MCRS1Q96EZ8 462 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 HSFY1Q96LI6 401 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 UROC1Q96N76 676 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 TWNKQ96RR1 684 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 PSMB7Q99436 277 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 SLC4A5Q9BY07 1137 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 GOLPH3Q9H4A6 298 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 NXF3Q9H4D5 531 aaKnown RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 SMYD3Q9H7B4 428 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 DDX56Q9NY93 547 aaKnown RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 DMGDHQ9UI17 866 aaKnown RBP5.7□□□□□ -1.5
COL17A1-206ENST00000483876 PADI3Q9ULW8 664 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 HES2Q9Y543 173 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 INSL6Q9Y581 213 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 SNX9Q9Y5X1 595 aa5.7□□□□□ -1.5
COL17A1-206ENST00000483876 OTOGLQ3ZCN5 2332 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 ARHGEF37A1IGU5 675 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 ARL5CA6NH57 179 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 A8MXQ7 604 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 PTGESO14684 152 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 MICAL2O94851 1124 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 CALCAP01258 141 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 GLI1P08151 1106 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 KRT7P08729 469 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 SP9P0CG40 484 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 PCK1P35558 622 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 ACADSBP45954 432 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 LHX1P48742 406 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 FNTAP49354 379 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 AARSP49588 968 aaKnown RBP eCLIP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 PSMC1P62191 440 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 FAM193AP78312 1265 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 NFX1Q12986 1120 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 PAK2Q13177 524 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 GPS2Q13227 327 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 LPIN1Q14693 890 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 CCNG2Q16589 344 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 HADHQ16836 314 aaKnown RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 FAM47CQ5HY64 1035 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 SPDYCQ5MJ68 293 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 ALS2CLQ60I27 953 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 DNAJC24Q6P3W2 148 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 DRICH1Q6PGQ1 229 aaPredicted RBP5.69□□□□□ -1.5
COL17A1-206ENST00000483876 DCLRE1AQ6PJP8 1040 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 SLC24A5Q71RS6 500 aa5.69□□□□□ -1.5
COL17A1-206ENST00000483876 VSIG1Q86XK7 387 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms