RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 C11orf84Q9BUA3 381 aaPredicted RBP27.47■■□□□ 1.99
SHOX2-204ENST00000483851 DDX23Q9BUQ8 820 aaKnown RBP27.47■■□□□ 1.99
SHOX2-204ENST00000483851 DCLK3Q9C098 648 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 hCG_1818297A0A087WSY0 165 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 SYN3O14994 580 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 B4GALT3O60512 393 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 ITGB1P05556 798 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 MRPS5P82675 430 aaKnown RBP27.47■■□□□ 1.99
SHOX2-204ENST00000483851 TTC27Q6P3X3 843 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 DRICH1Q6PGQ1 229 aaPredicted RBP27.47■■□□□ 1.99
SHOX2-204ENST00000483851 NPAS4Q8IUM7 802 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 CCDC105Q8IYK2 499 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 HASPINQ8TF76 798 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 HERPUD2Q9BSE4 406 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 PNPLA8Q9NP80 782 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 TBX21Q9UL17 535 aa27.47■■□□□ 1.99
SHOX2-204ENST00000483851 C3orf70A6NLC5 250 aaPredicted RBP27.46■■□□□ 1.99
SHOX2-204ENST00000483851 PRPSAP2O60256 369 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 RNF40O75150 1001 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 GRAP2O75791 330 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 OAZ2O95190 189 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 KDELR1P24390 212 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 RFC2P35250 354 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 OR1G1P47890 313 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 GJA8P48165 433 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 ADIGQ0VDE8 80 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 TAF5Q15542 800 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 RAB41Q5JT25 222 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 DUPD1Q68J44 220 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 VSIG1Q86XK7 387 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 SIX6OS1Q8N1H7 587 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 IFT81Q8WYA0 676 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 ZBTB9Q96C00 473 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 SMOQ99835 787 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 FRMD8P1Q9BZ68 369 aaPredicted RBP27.46■■□□□ 1.99
SHOX2-204ENST00000483851 ZWILCHQ9H900 591 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 CNGB3Q9NQW8 809 aa27.46■■□□□ 1.99
SHOX2-204ENST00000483851 BEST1O76090 585 aa27.45■■□□□ 1.99
SHOX2-204ENST00000483851 MAP3K7CLP57077 242 aa27.45■■□□□ 1.99
SHOX2-204ENST00000483851 ADCY1Q08828 1119 aa27.45■■□□□ 1.99
SHOX2-204ENST00000483851 CCDC142Q17RM4 750 aa27.45■■□□□ 1.99
SHOX2-204ENST00000483851 TSEN2Q8NCE0 465 aaKnown RBP27.45■■□□□ 1.99
SHOX2-204ENST00000483851 MYLPFQ96A32 169 aa27.45■■□□□ 1.99
SHOX2-204ENST00000483851 CFAP57Q96MR6 1250 aa27.45■■□□□ 1.99
SHOX2-204ENST00000483851 SH3GL2Q99962 352 aa27.45■■□□□ 1.99
SHOX2-204ENST00000483851 TMEM175Q9BSA9 504 aa27.45■■□□□ 1.99
SHOX2-204ENST00000483851 HEMGNQ9BXL5 484 aa27.45■■□□□ 1.99
SHOX2-204ENST00000483851 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.45■■□□□ 1.99
SHOX2-204ENST00000483851 NFU1Q9UMS0 254 aa27.45■■□□□ 1.99
SHOX2-204ENST00000483851 TET1Q8NFU7 2136 aa27.45■■□□□ 1.98
SHOX2-204ENST00000483851 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.44■■□□□ 1.98
SHOX2-204ENST00000483851 ESYT3A0FGR9 886 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 GOLGA6BA6NDN3 693 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 PI4K2BG5E9Z4 385 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 ENDOD1O94919 500 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 ECEL1O95672 775 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 MATKP42679 507 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 STRADAQ7RTN6 431 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 MREGQ8N565 214 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 ATL2Q8NHH9 583 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 FAM172AQ8WUF8 416 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 SCLYQ96I15 445 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 COLEC11Q9BWP8 271 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 FAM129AQ9BZQ8 928 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 SCN5AQ14524 2016 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 DAB1O75553 588 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 YWHAZP63104 245 aaKnown RBP27.44■■□□□ 1.98
SHOX2-204ENST00000483851 LMNB2Q03252 620 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 C15orf59Q2T9L4 293 aaPredicted RBP27.44■■□□□ 1.98
SHOX2-204ENST00000483851 ALS2CLQ60I27 953 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 C4orf50Q6ZRC1 276 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 SCML4Q8N228 414 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 C1orf54Q8WWF1 131 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 NRDE2Q9H7Z3 1164 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 KLHL11Q9NVR0 708 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 PCSK1NQ9UHG2 260 aa27.44■■□□□ 1.98
SHOX2-204ENST00000483851 TADA2AO75478 443 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 ALDH2P05091 517 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 CCL23P55773 120 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 PDK2Q15119 407 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 ANKS1BQ7Z6G8 1248 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 TTC13Q8NBP0 860 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 KCTD6Q8NC69 237 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 ZMIZ2Q8NF64 920 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 OR10T2Q8NGX3 314 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 CLEC4CQ8WTT0 213 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 RIN2Q8WYP3 895 aaPredicted RBP27.43■■□□□ 1.98
SHOX2-204ENST00000483851 NGRNQ9NPE2 291 aaKnown RBP27.43■■□□□ 1.98
SHOX2-204ENST00000483851 DNAJB4Q9UDY4 337 aa27.43■■□□□ 1.98
SHOX2-204ENST00000483851 MDM4O15151 490 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 FAM153BP0C7A2 387 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 TKTL1P51854 596 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 FAM153CQ494X1 144 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 CYP4V2Q6ZWL3 525 aaPredicted RBP27.42■■□□□ 1.98
SHOX2-204ENST00000483851 MAP7D3Q8IWC1 876 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 DNAJC5GQ8N7S2 189 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 PPP1R12CQ9BZL4 782 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 PLEKHA4Q9H4M7 779 aa27.42■■□□□ 1.98
SHOX2-204ENST00000483851 DMAP1Q9NPF5 467 aaPredicted RBP27.42■■□□□ 1.98
SHOX2-204ENST00000483851 CHST7Q9NS84 486 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms