RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 RAB6CQ53S08 254 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 OVOS1Q6IE37 1185 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 SYDE1Q6ZW31 735 aaPredicted RBP14.71□□□□□ -0.05
CLK3-204ENST00000483723 CTU1Q7Z7A3 348 aaKnown RBP14.71□□□□□ -0.05
CLK3-204ENST00000483723 DDX42Q86XP3 938 aaKnown RBP eCLIP14.71□□□□□ -0.05
CLK3-204ENST00000483723 ATL2Q8NHH9 583 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 HASPINQ8TF76 798 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 TEKT4Q8WW24 435 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 SMARCD1Q96GM5 515 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 CFAP57Q96MR6 1250 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 RAB6CQ9H0N0 254 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 NRDE2Q9H7Z3 1164 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 ZWILCHQ9H900 591 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 KRT82Q9NSB4 513 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 TMEM30AQ9NV96 361 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 PCSK1NQ9UHG2 260 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 NEU2Q9Y3R4 380 aa14.71□□□□□ -0.05
CLK3-204ENST00000483723 PTPRDP23468 1912 aa14.71□□□□□ -0.06
CLK3-204ENST00000483723 HOXA2O43364 376 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 HSF2BPO75031 334 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 AP1G2O75843 785 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 FBXO21O94952 628 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 FAM153BP0C7A2 387 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 CENPFP49454 3210 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 MAP3K7CLP57077 242 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 ADIGQ0VDE8 80 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 MAPRE1Q15691 268 aaKnown RBP14.7□□□□□ -0.06
CLK3-204ENST00000483723 FAM153CQ494X1 144 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 TRIM60Q495X7 471 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 SND1Q7KZF4 910 aaKnown RBP eCLIP14.7□□□□□ -0.06
CLK3-204ENST00000483723 BNIPLQ7Z465 357 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 LRRTM3Q86VH5 581 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 VSIG1Q86XK7 387 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 CCDC105Q8IYK2 499 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 MREGQ8N565 214 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 OR10T2Q8NGX3 314 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 FAM71BQ8TC56 605 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 NT5C3BQ969T7 300 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 MYLPFQ96A32 169 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 SCLYQ96I15 445 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 FAM193BQ96PV7 902 aaPredicted RBP14.7□□□□□ -0.06
CLK3-204ENST00000483723 TBCBQ99426 244 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 LRRC4Q9HBW1 653 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 TMLHEQ9NVH6 421 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.7□□□□□ -0.06
CLK3-204ENST00000483723 DNAJB4Q9UDY4 337 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 FAM153AQ9UHL3 310 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 TBX21Q9UL17 535 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 DRG1Q9Y295 367 aaKnown RBP14.7□□□□□ -0.06
CLK3-204ENST00000483723 DNAH12Q6ZR08 3092 aa14.7□□□□□ -0.06
CLK3-204ENST00000483723 MATKP42679 507 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 CACNA2D1P54289 1103 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 HDAC4P56524 1084 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 KCNT1Q5JUK3 1230 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 ZFYVE27Q5T4F4 411 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 BBS12Q6ZW61 710 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 STRADAQ7RTN6 431 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 SCML4Q8N228 414 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 ANKLE1Q8NAG6 615 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 GRK7Q8WTQ7 553 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 FAM172AQ8WUF8 416 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 ACSF2Q96CM8 615 aaPredicted RBP14.69□□□□□ -0.06
CLK3-204ENST00000483723 SLC2A13Q96QE2 648 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 KCNK16Q96T55 309 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 ADAM33Q9BZ11 813 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 NEUROG2Q9H2A3 272 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 CNGB3Q9NQW8 809 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 HPCAL4Q9UM19 191 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 FNDC1Q4ZHG4 1894 aaPredicted RBP14.69□□□□□ -0.06
CLK3-204ENST00000483723 SYN3O14994 580 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 TRAPPC3O43617 180 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 PRPSAP2O60256 369 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 DAB1O75553 588 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 ECEL1O95672 775 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 DESP17661 470 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 GBP1P32455 592 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 OR1G1P47890 313 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 NDUFV1P49821 464 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 TKTL1P51854 596 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 CCL23P55773 120 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 DAOAP59103 153 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 YWHAZP63104 245 aaKnown RBP14.69□□□□□ -0.06
CLK3-204ENST00000483723 ATP11AP98196 1134 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 YWHAHQ04917 246 aaPredicted RBP14.69□□□□□ -0.06
CLK3-204ENST00000483723 RNASELQ05823 741 aaKnown RBP14.69□□□□□ -0.06
CLK3-204ENST00000483723 MRPL58Q14197 206 aaKnown RBP14.69□□□□□ -0.06
CLK3-204ENST00000483723 PDK2Q15119 407 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 SMTNL2Q2TAL5 461 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 ODF2Q5BJF6 829 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 NPAS4Q8IUM7 802 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 DEFB106AQ8N104 65 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 KCTD6Q8NC69 237 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 ATG4AQ8WYN0 398 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 VWCEQ96DN2 955 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 TMEM209Q96SK2 561 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 FRMD8P1Q9BZ68 369 aaPredicted RBP14.69□□□□□ -0.06
CLK3-204ENST00000483723 PNPLA8Q9NP80 782 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 ZDHHC18Q9NUE0 388 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 GRHL1Q9NZI5 618 aa14.69□□□□□ -0.06
CLK3-204ENST00000483723 LRFN2Q9ULH4 789 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms