RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 KIF26AQ9ULI4 1882 aaPredicted RBP27.23■■□□□ 1.95
PDCD4-208ENST00000483670 SMTNL1A8MU46 457 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 RNF225M0QZC1 329 aaPredicted RBP27.23■■□□□ 1.95
PDCD4-208ENST00000483670 NUBP1P53384 320 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 KRT31Q15323 416 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 MEA1Q16626 185 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 FKBP15Q5T1M5 1219 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 ASTLQ6HA08 431 aaPredicted RBP27.23■■□□□ 1.95
PDCD4-208ENST00000483670 PIGZQ86VD9 579 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 TTC30AQ86WT1 665 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 DDX42Q86XP3 938 aaKnown RBP eCLIP27.23■■□□□ 1.95
PDCD4-208ENST00000483670 GPIHBP1Q8IV16 184 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 LRRC3BQ96PB8 259 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 SLC22A12Q96S37 553 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 GMIPQ9P107 970 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.23■■□□□ 1.95
PDCD4-208ENST00000483670 CCL26Q9Y258 94 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 USP3Q9Y6I4 520 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 ZDBF2Q9HCK1 2354 aa27.23■■□□□ 1.95
PDCD4-208ENST00000483670 ARNTLO00327 626 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 MED7O43513 233 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 PDGFBP01127 241 aaPredicted RBP27.22■■□□□ 1.95
PDCD4-208ENST00000483670 CDK11BP21127 795 aaKnown RBP27.22■■□□□ 1.95
PDCD4-208ENST00000483670 PLA2G4AP47712 749 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 RAB41Q5JT25 222 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 GPRIN1Q7Z2K8 1008 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 TADA2BQ86TJ2 420 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 ARHGAP18Q8N392 663 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 FLCNQ8NFG4 579 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 SHC3Q92529 594 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 TBC1D17Q9HA65 648 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 TAB2Q9NYJ8 693 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 HCN4Q9Y3Q4 1203 aa27.22■■□□□ 1.95
PDCD4-208ENST00000483670 STK25O00506 426 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 MAN2B1O00754 1011 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 AOC1P19801 751 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 PDE4CQ08493 712 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 USP4Q13107 963 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 ZNF77Q15935 545 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 TFAP2BQ92481 460 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 CDK5RAP1Q96SZ6 601 aaKnown RBP27.21■■□□□ 1.95
PDCD4-208ENST00000483670 NELL2Q99435 816 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 DDX23Q9BUQ8 820 aaKnown RBP27.21■■□□□ 1.95
PDCD4-208ENST00000483670 KCNH6Q9H252 994 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 C8orf33Q9H7E9 229 aaPredicted RBP27.21■■□□□ 1.95
PDCD4-208ENST00000483670 LRRC4Q9HBW1 653 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 SIX2Q9NPC8 291 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 LIMA1Q9UHB6 759 aaKnown RBP27.21■■□□□ 1.95
PDCD4-208ENST00000483670 MRPS17Q9Y2R5 130 aaKnown RBP27.21■■□□□ 1.95
PDCD4-208ENST00000483670 TICRRQ7Z2Z1 1910 aa27.21■■□□□ 1.95
PDCD4-208ENST00000483670 COL4A2P08572 1712 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 ZNF18P17022 549 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 MTF1Q14872 753 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 NCAPHQ15003 741 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 PDGFRLQ15198 375 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 ARHGAP44Q17R89 818 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 PKDCCQ504Y2 493 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 ZNF276Q8N554 614 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 AOPEPQ8N6M6 819 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 SH3RF2Q8TEC5 729 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 KCTD13Q8WZ19 329 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 PRRX2Q99811 253 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 NACA2Q9H009 215 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 VPS16Q9H269 839 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 CYLDQ9NQC7 956 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 HEBP1Q9NRV9 189 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 CLIC5Q9NZA1 410 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 DNAJC12Q9UKB3 198 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 DAAM1Q9Y4D1 1078 aa27.2■■□□□ 1.94
PDCD4-208ENST00000483670 KANSL1LA0AUZ9 987 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 LRRC10BA6NIK2 292 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 CYP26A1O43174 497 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 CAVIN2O95810 425 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 MBL2P11226 248 aaPredicted RBP27.19■■□□□ 1.94
PDCD4-208ENST00000483670 BRD2P25440 801 aaKnown RBP27.19■■□□□ 1.94
PDCD4-208ENST00000483670 AVPR2P30518 371 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 ZNF165P49910 485 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 CWF19L1Q69YN2 538 aaKnown RBP27.19■■□□□ 1.94
PDCD4-208ENST00000483670 GJB7Q6PEY0 223 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 KLHDC10Q6PID8 442 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 ZNF852Q6ZMS4 543 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 FAM83CQ9BQN1 747 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 OSBPL6Q9BZF3 934 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 RNF38Q9H0F5 515 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 PLCB1Q9NQ66 1216 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 ZNF318Q5VUA4 2279 aa27.19■■□□□ 1.94
PDCD4-208ENST00000483670 SYCE3A1L190 88 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 M0QYV0 167 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 COCHO43405 550 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 TLR5O60602 858 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 RALAP11233 206 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 GNA15P30679 374 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 USP8P40818 1118 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 TKTL1P51854 596 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 COPB1P53618 953 aaKnown RBP27.18■■□□□ 1.94
PDCD4-208ENST00000483670 KCNMA1Q12791 1236 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 KLHDC7AQ5VTJ3 777 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 TPRG1Q6ZUI0 275 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 UBA3Q8TBC4 463 aa27.18■■□□□ 1.94
PDCD4-208ENST00000483670 OSCP1Q8WVF1 389 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms