RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 PKN3Q6P5Z2 889 aa21.04■□□□□ 0.96
HPS4-213ENST00000483631 PRR23BQ6ZRT6 265 aa21.04■□□□□ 0.96
HPS4-213ENST00000483631 SYT13Q7L8C5 426 aa21.04■□□□□ 0.96
HPS4-213ENST00000483631 OTUB2Q96DC9 234 aa21.04■□□□□ 0.96
HPS4-213ENST00000483631 GTPBP4Q9BZE4 634 aaKnown RBP21.04■□□□□ 0.96
HPS4-213ENST00000483631 FBXO44Q9H4M3 255 aa21.04■□□□□ 0.96
HPS4-213ENST00000483631 FAM124BQ9H5Z6 455 aaPredicted RBP21.04■□□□□ 0.96
HPS4-213ENST00000483631 KRT82Q9NSB4 513 aa21.04■□□□□ 0.96
HPS4-213ENST00000483631 RMND1Q9NWS8 449 aa21.04■□□□□ 0.96
HPS4-213ENST00000483631 TBC1D14Q9P2M4 693 aa21.04■□□□□ 0.96
HPS4-213ENST00000483631 E2F8A0AVK6 867 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 ABL1P00519 1130 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 EIF2DP41214 584 aaKnown RBP21.03■□□□□ 0.96
HPS4-213ENST00000483631 COBLL1Q53SF7 1204 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 ADGRG2Q8IZP9 1017 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 CCDC150Q8NCX0 1101 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 TTC16Q8NEE8 873 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 LOXL4Q96JB6 756 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 TMEM8AQ9HCN3 771 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 PNPLA8Q9NP80 782 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 MAPK8IP1Q9UQF2 711 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 MYOFQ9NZM1 2061 aa21.03■□□□□ 0.96
HPS4-213ENST00000483631 MBL2P11226 248 aaPredicted RBP21.02■□□□□ 0.96
HPS4-213ENST00000483631 GCLMP48507 274 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 NUCB2P80303 420 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 PPP3CAQ08209 521 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 KRT39Q6A163 491 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 HEATR6Q6AI08 1181 aaKnown RBP21.02■□□□□ 0.96
HPS4-213ENST00000483631 FILIP1Q7Z7B0 1213 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 FMR1NBQ8N0W7 255 aaPredicted RBP21.02■□□□□ 0.96
HPS4-213ENST00000483631 TTC39CQ8N584 583 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 ZMIZ2Q8NF64 920 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 SCAMP5Q8TAC9 235 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 SLC2A14Q8TDB8 520 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 TAS1R2Q8TE23 839 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 GAB3Q8WWW8 586 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 HNRNPABQ99729 332 aaKnown RBP21.02■□□□□ 0.96
HPS4-213ENST00000483631 SMOQ99835 787 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 NT5C1AQ9BXI3 368 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 NIF3L1Q9GZT8 377 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 EML5Q05BV3 1969 aa21.02■□□□□ 0.96
HPS4-213ENST00000483631 COCHO43405 550 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 STX10O60499 249 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 CYP17A1P05093 508 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 FAM200BP0CF97 657 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 OPRD1P41143 372 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 IFRD2Q12894 506 aaPredicted RBP21.01■□□□□ 0.95
HPS4-213ENST00000483631 GAB4Q2WGN9 574 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 SPOPLQ6IQ16 392 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.01■□□□□ 0.95
HPS4-213ENST00000483631 EZH1Q92800 747 aaPredicted RBP21.01■□□□□ 0.95
HPS4-213ENST00000483631 GSDMAQ96QA5 445 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 APOBEC3GQ9HC16 384 aaKnown RBP21.01■□□□□ 0.95
HPS4-213ENST00000483631 GDPD2Q9HCC8 539 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 SMPD4Q9NXE4 827 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 CFAP97Q9P2B7 532 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 HMGXB4Q9UGU5 601 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 EBF1Q9UH73 591 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 USP18Q9UMW8 372 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 SDK1Q7Z5N4 2213 aa21.01■□□□□ 0.95
HPS4-213ENST00000483631 GOLGA6L4A6NEF3 574 aa21■□□□□ 0.95
HPS4-213ENST00000483631 CETN3O15182 167 aa21■□□□□ 0.95
HPS4-213ENST00000483631 CILPO75339 1184 aa21■□□□□ 0.95
HPS4-213ENST00000483631 ADH1CP00326 375 aa21■□□□□ 0.95
HPS4-213ENST00000483631 TRIM49P0CI25 452 aa21■□□□□ 0.95
HPS4-213ENST00000483631 TRIM49CP0CI26 452 aa21■□□□□ 0.95
HPS4-213ENST00000483631 CCDC130P13994 396 aa21■□□□□ 0.95
HPS4-213ENST00000483631 DHCR24Q15392 516 aa21■□□□□ 0.95
HPS4-213ENST00000483631 RSPO4Q2I0M5 234 aaPredicted RBP21■□□□□ 0.95
HPS4-213ENST00000483631 NAIF1Q69YI7 327 aaPredicted RBP21■□□□□ 0.95
HPS4-213ENST00000483631 CEP68Q76N32 757 aa21■□□□□ 0.95
HPS4-213ENST00000483631 DGLUCYQ7Z3D6 616 aa21■□□□□ 0.95
HPS4-213ENST00000483631 RPLP0P6Q8NHW5 317 aa21■□□□□ 0.95
HPS4-213ENST00000483631 ELMO3Q96BJ8 720 aa21■□□□□ 0.95
HPS4-213ENST00000483631 ZFRQ96KR1 1074 aaKnown RBP21■□□□□ 0.95
HPS4-213ENST00000483631 PARD6AQ9NPB6 346 aa21■□□□□ 0.95
HPS4-213ENST00000483631 TLR8Q9NR97 1041 aaKnown RBP21■□□□□ 0.95
HPS4-213ENST00000483631 CHORDC1Q9UHD1 332 aaPredicted RBP21■□□□□ 0.95
HPS4-213ENST00000483631 A0A0A0MRY4 1105 aa20.99■□□□□ 0.95
HPS4-213ENST00000483631 RPP40O75818 363 aaKnown RBP20.99■□□□□ 0.95
HPS4-213ENST00000483631 EPB41P11171 864 aaKnown RBP20.99■□□□□ 0.95
HPS4-213ENST00000483631 CSRP2Q16527 193 aa20.99■□□□□ 0.95
HPS4-213ENST00000483631 LPAL2Q16609 132 aa20.99■□□□□ 0.95
HPS4-213ENST00000483631 HSF5Q4G112 596 aaPredicted RBP20.99■□□□□ 0.95
HPS4-213ENST00000483631 CACNA2D4Q7Z3S7 1137 aa20.99■□□□□ 0.95
HPS4-213ENST00000483631 C12orf29Q8N999 325 aa20.99■□□□□ 0.95
HPS4-213ENST00000483631 SPATA20Q8TB22 786 aa20.99■□□□□ 0.95
HPS4-213ENST00000483631 CYFIP2Q96F07 1278 aa20.99■□□□□ 0.95
HPS4-213ENST00000483631 GMIPQ9P107 970 aa20.99■□□□□ 0.95
HPS4-213ENST00000483631 SCML2Q9UQR0 700 aa20.99■□□□□ 0.95
HPS4-213ENST00000483631 PCDHA5Q9Y5H7 936 aa20.99■□□□□ 0.95
HPS4-213ENST00000483631 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.98■□□□□ 0.95
HPS4-213ENST00000483631 BEST1O76090 585 aa20.98■□□□□ 0.95
HPS4-213ENST00000483631 SMC2O95347 1197 aa20.98■□□□□ 0.95
HPS4-213ENST00000483631 APBB3O95704 486 aa20.98■□□□□ 0.95
HPS4-213ENST00000483631 MAP3K7CLP57077 242 aa20.98■□□□□ 0.95
HPS4-213ENST00000483631 MRPS21P82921 87 aaKnown RBP20.98■□□□□ 0.95
HPS4-213ENST00000483631 SPEM2Q0P670 501 aa20.98■□□□□ 0.95
HPS4-213ENST00000483631 SRSF5Q13243 272 aaKnown RBP20.98■□□□□ 0.95
HPS4-213ENST00000483631 DMC1Q14565 340 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms