RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 EVPLQ92817 2033 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 A0A1B0GUA9 196 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.53□□□□□ -1.04
SORT1-205ENST00000483508 TMEM191CA6NGB0 347 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 RRN3P2A6NIE6 340 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 PRR33A8MZF0 331 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 SMAPO00193 183 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 LIASO43766 372 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 ASS1P00966 412 aaKnown RBP8.53□□□□□ -1.04
SORT1-205ENST00000483508 CHRNA1P02708 482 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 KRT1P04264 644 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 RPLP2P05387 115 aaKnown RBP8.53□□□□□ -1.04
SORT1-205ENST00000483508 TMEM191BP0C7N4 346 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 STAG3L1P0CL83 205 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 BRAFP15056 766 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 IBSPP21815 317 aaPredicted RBP8.53□□□□□ -1.04
SORT1-205ENST00000483508 HOXC8P31273 242 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 SLC8A1P32418 973 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 BMPR1AP36894 532 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 ACOT2P49753 483 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 NFX1Q12986 1120 aaKnown RBP8.53□□□□□ -1.04
SORT1-205ENST00000483508 RIPK1Q13546 671 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 NCOA4Q13772 614 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 MORF4L2Q15014 288 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 TARBP2Q15633 366 aaKnown RBP8.53□□□□□ -1.04
SORT1-205ENST00000483508 KYNUQ16719 465 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 SPOUT1Q5T280 376 aaKnown RBP8.53□□□□□ -1.04
SORT1-205ENST00000483508 IER5Q5VY09 327 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 SPOPLQ6IQ16 392 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 DNAJC24Q6P3W2 148 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 CYB5D1Q6P9G0 228 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 GSTA5Q7RTV2 222 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 POLNQ7Z5Q5 900 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 PCGF5Q86SE9 256 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 PARP9Q8IXQ6 854 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 CCDC63Q8NA47 563 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 TTC13Q8NBP0 860 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 TCP11Q8WWU5 503 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 ZNF606Q8WXB4 792 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 ATG4AQ8WYN0 398 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 KHSRPQ92945 711 aaKnown RBP eCLIP8.53□□□□□ -1.04
SORT1-205ENST00000483508 SLITRK1Q96PX8 696 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 HERPUD2Q9BSE4 406 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 MRPL4Q9BYD3 311 aaKnown RBP8.53□□□□□ -1.04
SORT1-205ENST00000483508 TRIM7Q9C029 511 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 NIF3L1Q9GZT8 377 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 FAM49AQ9H0Q0 323 aaPredicted RBP8.53□□□□□ -1.04
SORT1-205ENST00000483508 C2orf40Q9H1Z8 148 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 CD320Q9NPF0 282 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 HAUS2Q9NVX0 235 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 EURLQ9NYK6 297 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.53□□□□□ -1.04
SORT1-205ENST00000483508 LRFN2Q9ULH4 789 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 SHOC2Q9UQ13 582 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 R3HDM2Q9Y2K5 976 aaKnown RBP8.53□□□□□ -1.04
SORT1-205ENST00000483508 ARL2BPQ9Y2Y0 163 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 CEP83Q9Y592 693 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 NUB1Q9Y5A7 615 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 CDY2AQ9Y6F7 541 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 PTPRJQ12913 1337 aa8.53□□□□□ -1.04
SORT1-205ENST00000483508 RALGAPA2Q2PPJ7 1873 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 GSTTP1A0A1W2PQM5 241 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 TCRBV5S1A1TA0A578 114 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 ENPP3O14638 875 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 OGTO15294 1046 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 PRPF4O43172 522 aaKnown RBP eCLIP8.52□□□□□ -1.05
SORT1-205ENST00000483508 MED7O43513 233 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 DCXO43602 365 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 MGRN1O60291 552 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 MAFO75444 373 aaPredicted RBP8.52□□□□□ -1.05
SORT1-205ENST00000483508 TOM1L1O75674 476 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 GJB6O95452 261 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 ITGAVP06756 1048 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 TSHRP16473 764 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 CD58P19256 250 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 ATP4AP20648 1035 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 EIF4BP23588 611 aaKnown RBP8.52□□□□□ -1.05
SORT1-205ENST00000483508 POLR2BP30876 1174 aaKnown RBP8.52□□□□□ -1.05
SORT1-205ENST00000483508 STX2P32856 288 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 SSR1P43307 286 aaKnown RBP8.52□□□□□ -1.05
SORT1-205ENST00000483508 MAGEA4P43358 317 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 IFNAR2P48551 515 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 WNT7BP56706 349 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 GSCP56915 257 aaPredicted RBP8.52□□□□□ -1.05
SORT1-205ENST00000483508 MRPS6P82932 125 aaKnown RBP8.52□□□□□ -1.05
SORT1-205ENST00000483508 IL9RQ01113 521 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 CCDC15Q0P6D6 951 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 MKRN4PQ13434 485 aaPredicted RBP8.52□□□□□ -1.05
SORT1-205ENST00000483508 LPIN1Q14693 890 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 SGSM1Q2NKQ1 1148 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 CCDC38Q502W7 563 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 UBAP2Q5T6F2 1119 aaKnown RBP8.52□□□□□ -1.05
SORT1-205ENST00000483508 LMBRD2Q68DH5 695 aaPredicted RBP8.52□□□□□ -1.05
SORT1-205ENST00000483508 RNF43Q68DV7 783 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 CDCA2Q69YH5 1023 aaPredicted RBP8.52□□□□□ -1.05
SORT1-205ENST00000483508 SPOCD1Q6ZMY3 1216 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 TSHZ1Q6ZSZ6 1077 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 SPATA21Q7Z572 469 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 ANKS1BQ7Z6G8 1248 aa8.52□□□□□ -1.05
SORT1-205ENST00000483508 ZBTB8OSQ8IWT0 167 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms