RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 GPRIN1Q7Z2K8 1008 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 CCDC186Q7Z3E2 898 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 ARL14EPQ8N8R7 260 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-214ENST00000482733 KCTD13Q8WZ19 329 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 DNASE1L2Q92874 299 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 USP13Q92995 863 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-214ENST00000482733 RSPRY1Q96DX4 576 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 TRPV5Q9NQA5 729 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 GMIPQ9P107 970 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 ARHGAP26Q9UNA1 814 aa17.49■□□□□ 0.39
HMGN1-214ENST00000482733 M0QYV0 167 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 CHADO15335 359 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 OLFM2O95897 454 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 OAS1P00973 400 aaKnown RBP17.48■□□□□ 0.39
HMGN1-214ENST00000482733 ATP1A3P13637 1013 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 TCF3P15923 654 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 GDI1P31150 447 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 SLC7A9P82251 487 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 PTK2Q05397 1052 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 RAPGEF1Q13905 1077 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 FILIP1LQ4L180 1135 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 ARHGAP29Q52LW3 1261 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 APTXQ7Z2E3 356 aaKnown RBP17.48■□□□□ 0.39
HMGN1-214ENST00000482733 ARHGAP18Q8N392 663 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 UBA3Q8TBC4 463 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 ZNF606Q8WXB4 792 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 HSFY1Q96LI6 401 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 CYP2S1Q96SQ9 504 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 ZSWIM1Q9BR11 485 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 NAA15Q9BXJ9 866 aaKnown RBP17.48■□□□□ 0.39
HMGN1-214ENST00000482733 STK33Q9BYT3 514 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 SMG9Q9H0W8 520 aaKnown RBP17.48■□□□□ 0.39
HMGN1-214ENST00000482733 LRRC4Q9HBW1 653 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 CBX8Q9HC52 389 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 C11orf16Q9NQ32 467 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 FHOD1Q9Y613 1164 aa17.48■□□□□ 0.39
HMGN1-214ENST00000482733 FAM86C2PA6NEL3 165 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 FOXN3O00409 490 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-214ENST00000482733 CYP26A1O43174 497 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 THAP12O43422 761 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 TKTL1P51854 596 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 DRAP1Q14919 205 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-214ENST00000482733 CC2D1AQ6P1N0 951 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-214ENST00000482733 TADA2BQ86TJ2 420 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 GPIHBP1Q8IV16 184 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 FAM71AQ8IYT1 594 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 KIAA1958Q8N8K9 716 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 SLC35F5Q8WV83 523 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 PBXIP1Q96AQ6 731 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 SHDQ96IW2 340 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 PCMTD1Q96MG8 357 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-214ENST00000482733 ERGIC2Q96RQ1 377 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 SLC22A12Q96S37 553 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 CDK5RAP1Q96SZ6 601 aaKnown RBP17.47■□□□□ 0.39
HMGN1-214ENST00000482733 ARHGEF3Q9NR81 526 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 AJAP1Q9UKB5 411 aaPredicted RBP17.47■□□□□ 0.39
HMGN1-214ENST00000482733 CCL26Q9Y258 94 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 SIK3Q9Y2K2 1263 aa17.47■□□□□ 0.39
HMGN1-214ENST00000482733 GOLGA6L19H0YKK7 550 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 ZBED1O96006 694 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 PRKCQQ04759 706 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 SYCP1Q15431 976 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 SLC44A4Q53GD3 710 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 PM20D1Q6GTS8 502 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 DDX42Q86XP3 938 aaKnown RBP eCLIP17.46■□□□□ 0.394e-6■□□□□ 10.9
HMGN1-214ENST00000482733 SIX5Q8N196 739 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 SIX6OS1Q8N1H7 587 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 ZNF276Q8N554 614 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 CSGALNACT1Q8TDX6 532 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 SECISBP2LQ93073 1101 aaKnown RBP17.46■□□□□ 0.39
HMGN1-214ENST00000482733 LRRC3BQ96PB8 259 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 NACA2Q9H009 215 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 GANQ9H2C0 597 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 MFSD1Q9H3U5 465 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 CYLDQ9NQC7 956 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 CNGB3Q9NQW8 809 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 FAM207AQ9NSI2 230 aaPredicted RBP17.46■□□□□ 0.39
HMGN1-214ENST00000482733 CLIC5Q9NZA1 410 aa17.46■□□□□ 0.39
HMGN1-214ENST00000482733 MYO10Q9HD67 2058 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 TULP2O00295 520 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 COCHO43405 550 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 TLR5O60602 858 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 CALCAP01258 141 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 MBL2P11226 248 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-214ENST00000482733 RALAP11233 206 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 MLLT6P55198 1093 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-214ENST00000482733 USP4Q13107 963 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 MTF1Q14872 753 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 MLF2Q15773 248 aaPredicted RBP17.45■□□□□ 0.38
HMGN1-214ENST00000482733 ZNF77Q15935 545 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 KLHDC10Q6PID8 442 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 LUZP1Q86V48 1076 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 SCML4Q8N228 414 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 NEK11Q8NG66 645 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 SH3RF2Q8TEC5 729 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 STK32AQ8WU08 396 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 MSANTD3Q96H12 275 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 LRFN3Q9BTN0 628 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 RNF38Q9H0F5 515 aa17.45■□□□□ 0.38
HMGN1-214ENST00000482733 RTN4Q9NQC3 1192 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms