RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CPQQ9Y646 472 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 WNT6Q9Y6F9 365 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 GREB1Q4ZG55 1949 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 MIA3Q5JRA6 1907 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 DENND4CQ5VZ89 1909 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 OTOL1A6NHN0 477 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-213ENST00000482192 LEFTY2O00292 366 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 P4HA2O15460 535 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 ZDHHC11BP0C7U3 371 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 CCDC192P0DO97 292 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 MBL2P11226 248 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-213ENST00000482192 PPP2R5DQ14738 602 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 PON2Q15165 354 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-213ENST00000482192 MAMSTRQ6ZN01 415 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 DDX42Q86XP3 938 aaKnown RBP eCLIP12.56□□□□□ -0.42e-7■□□□□ 9.2
HMGN1-213ENST00000482192 TRIM59Q8IWR1 403 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 SLC4A11Q8NBS3 891 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 NKD2Q969F2 451 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-213ENST00000482192 EXOC4Q96A65 974 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 JAKMIP2Q96AA8 810 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 SRRTQ9BXP5 876 aaKnown RBP12.56□□□□□ -0.4
HMGN1-213ENST00000482192 DUSP16Q9BY84 665 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 NACA2Q9H009 215 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 ECT2Q9H8V3 914 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 PRMT8Q9NR22 394 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-213ENST00000482192 TLR8Q9NR97 1041 aaKnown RBP12.56□□□□□ -0.4
HMGN1-213ENST00000482192 SMPD4Q9NXE4 827 aa12.56□□□□□ -0.4
HMGN1-213ENST00000482192 CHORDC1Q9UHD1 332 aaPredicted RBP12.56□□□□□ -0.4
HMGN1-213ENST00000482192 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.56□□□□□ -0.4
HMGN1-213ENST00000482192 HHLA1C9JL84 531 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 SLC9A3R1O14745 358 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-213ENST00000482192 COCHO43405 550 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 GFRA3O60609 400 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 NFATC1O95644 943 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 ACO1P21399 889 aaKnown RBP12.55□□□□□ -0.4
HMGN1-213ENST00000482192 CCR3P51677 355 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 SLC8A3P57103 927 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 ZXDBP98169 803 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 CSTF1Q05048 431 aaKnown RBP12.55□□□□□ -0.4
HMGN1-213ENST00000482192 GRSF1Q12849 480 aaKnown RBP eCLIP12.55□□□□□ -0.4
HMGN1-213ENST00000482192 LRMPQ12912 555 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 NR1H3Q13133 447 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 CCINQ13939 588 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 EML3Q32P44 896 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 ARHGAP17Q68EM7 881 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 GPRIN1Q7Z2K8 1008 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 SYNPOQ8N3V7 929 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 NT5C1BQ96P26 610 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 CCSER2Q9H7U1 834 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 CFAP97Q9P2B7 532 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 SCML2Q9UQR0 700 aa12.55□□□□□ -0.4
HMGN1-213ENST00000482192 PATJQ8NI35 1801 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 TRDMT1O14717 391 aaKnown RBP12.54□□□□□ -0.4
HMGN1-213ENST00000482192 CYP26A1O43174 497 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 TLR5O60602 858 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 AFPP02771 609 aaKnown RBP12.54□□□□□ -0.4
HMGN1-213ENST00000482192 GJA4P35212 333 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 KCNH2Q12809 1159 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 TMEM196Q5HYL7 178 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 PPM1KQ8N3J5 372 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 SPEM1Q8N4L4 309 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 ANKRD52Q8NB46 1076 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 CHFRQ96EP1 664 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 GBP4Q96PP9 640 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 P2RY13Q9BPV8 354 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 NUP62CLQ9H1M0 184 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 SEMA4AQ9H3S1 761 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 CYLDQ9NQC7 956 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 RBM12Q9NTZ6 932 aaKnown RBP12.54□□□□□ -0.4
HMGN1-213ENST00000482192 KIAA1257Q9ULG3 409 aa12.54□□□□□ -0.4
HMGN1-213ENST00000482192 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 PRR23AA6NEV1 266 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 CD19P15391 556 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 CXCL12P48061 93 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 PSEN1P49768 467 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 KIF11P52732 1056 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 GCNT1Q02742 428 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 GOLGA7BQ2TAP0 167 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 SGO2Q562F6 1265 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 FSTL4Q6MZW2 842 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 TSSK4Q6SA08 328 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 Q6ZS52 159 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 CCDC186Q7Z3E2 898 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 PIGZQ86VD9 579 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 UBR7Q8N806 425 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 LMO3Q8TAP4 145 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 ZFRQ96KR1 1074 aaKnown RBP12.53□□□□□ -0.4
HMGN1-213ENST00000482192 FAM126AQ9BYI3 521 aaPredicted RBP12.53□□□□□ -0.4
HMGN1-213ENST00000482192 LINC00597Q9H2U6 94 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 TBC1D14Q9P2M4 693 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 HESX1Q9UBX0 185 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 DACH1Q9UI36 760 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 SH3BP1Q9Y3L3 701 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 PCDHGA2Q9Y5H1 932 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 R4GN57 208 aa12.53□□□□□ -0.4
HMGN1-213ENST00000482192 HELZP42694 1942 aaKnown RBP12.52□□□□□ -0.4
HMGN1-213ENST00000482192 ANAPC1Q9H1A4 1944 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms