RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ANHXE9PGG2 379 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 TMEM189-UBE2V1I3L0A0 370 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 USO1O60763 962 aaKnown RBP7.09□□□□□ -1.27
LRCH3-216ENST00000481048 NPTXRO95502 500 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 POU2F2P09086 479 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 LAMP2P13473 410 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 AKAP5P24588 427 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 HOXA9P31269 272 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 GBP1P32455 592 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 GBP2P32456 591 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-216ENST00000481048 TRAPPC10P48553 1259 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 SRSF3P84103 164 aaKnown RBP7.09□□□□□ -1.27
LRCH3-216ENST00000481048 PRPF4BQ13523 1007 aaKnown RBP7.09□□□□□ -1.27
LRCH3-216ENST00000481048 HSP90AA2PQ14568 343 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-216ENST00000481048 HAUS3Q68CZ6 603 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 RNF111Q6ZNA4 994 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 PALB2Q86YC2 1186 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 TMEM151BQ8IW70 566 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 CCDC105Q8IYK2 499 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 NECAB1Q8N987 351 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 ENOX1Q8TC92 643 aaKnown RBP7.09□□□□□ -1.27
LRCH3-216ENST00000481048 RIN2Q8WYP3 895 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-216ENST00000481048 KIFAP3Q92845 792 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 NKD2Q969F2 451 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-216ENST00000481048 ZNF707Q96C28 371 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-216ENST00000481048 IFT74Q96LB3 600 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 APOL6Q9BWW8 343 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 NXF3Q9H4D5 531 aaKnown RBP7.09□□□□□ -1.27
LRCH3-216ENST00000481048 SLC2A4RGQ9NR83 387 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 LIMCH1Q9UPQ0 1083 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 RALGAPA1Q6GYQ0 2036 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 MYO15AQ9UKN7 3530 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 CEP250Q9BV73 2442 aa7.09□□□□□ -1.27
LRCH3-216ENST00000481048 CFAP54Q96N23 3096 aa7.09□□□□□ -1.28
LRCH3-216ENST00000481048 PDCD11Q14690 1871 aaKnown RBP7.09□□□□□ -1.28
LRCH3-216ENST00000481048 ARHGEF35A5YM69 484 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 PRR23AA6NEV1 266 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 B4GALT5O43286 388 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 TRAPPC3O43617 180 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 FOXD2O60548 495 aaPredicted RBP7.08□□□□□ -1.28
LRCH3-216ENST00000481048 DNAJA2O60884 412 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 N4BP1O75113 896 aaKnown RBP7.08□□□□□ -1.28
LRCH3-216ENST00000481048 MED24O75448 989 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 RFPL2O75678 378 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 PRKCBP05771 671 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 MCM7P33993 719 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 HMGN5P82970 282 aaKnown RBP7.08□□□□□ -1.28
LRCH3-216ENST00000481048 SLC14A2Q15849 920 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 DCAF4L1Q3SXM0 396 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 CWF19L1Q69YN2 538 aaKnown RBP7.08□□□□□ -1.28
LRCH3-216ENST00000481048 DCLRE1AQ6PJP8 1040 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 DEPTORQ8TB45 409 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 LNX1Q8TBB1 728 aaPredicted RBP7.08□□□□□ -1.28
LRCH3-216ENST00000481048 SHDQ96IW2 340 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 ZSCAN31Q96LW9 406 aaPredicted RBP7.08□□□□□ -1.28
LRCH3-216ENST00000481048 UROC1Q96N76 676 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 MYADMQ96S97 322 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 CLSTN3Q9BQT9 956 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 RAB34Q9BZG1 259 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 TMEM60Q9H2L4 133 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 SMOC2Q9H3U7 446 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 C17orf75Q9HAS0 396 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 FAM86C1Q9NVL1 165 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 SIRT5Q9NXA8 310 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 MBD1Q9UIS9 605 aaPredicted RBP7.08□□□□□ -1.28
LRCH3-216ENST00000481048 FBXW11Q9UKB1 542 aa7.08□□□□□ -1.28
LRCH3-216ENST00000481048 TPRP12270 2363 aaKnown RBP7.08□□□□□ -1.28
LRCH3-216ENST00000481048 K7ERI5 159 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 LAD1O00515 517 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 PTGESO14684 152 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 PI15O43692 258 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 TRIM13O60858 407 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 RECQL4O94761 1208 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 LARGE1O95461 756 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 OR52Z1P0C646 297 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 SPATA31D3P0C874 917 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 PI3P19957 117 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 STARD6P59095 220 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 RAB33AQ14088 237 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 ANGPT1Q15389 498 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 NAB2Q15742 525 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 PSMD5Q16401 504 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 RTP2Q5QGT7 225 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 PPM1LQ5SGD2 360 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 LIN9Q5TKA1 542 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 FAM171A1Q5VUB5 890 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 RSPO2Q6UXX9 243 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-216ENST00000481048 CEP128Q6ZU80 1094 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 SPATA31D4Q6ZUB0 917 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 ANKS3Q6ZW76 656 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 MTSS1LQ765P7 747 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 MAEAQ7L5Y9 396 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 ASCL5Q7RTU5 278 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 CDR2LQ86X02 465 aaPredicted RBP7.07□□□□□ -1.28
LRCH3-216ENST00000481048 CEP57Q86XR8 500 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 RELL1Q8IUW5 271 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 FBXO18Q8NFZ0 1043 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 FEZF2Q8TBJ5 459 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 C8orf76Q96K31 380 aa7.07□□□□□ -1.28
LRCH3-216ENST00000481048 RHOVQ96L33 236 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms