RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 NAP1L3Q99457 506 aaPredicted RBP15.52■□□□□ 0.08
SNRNP200-205ENST00000480835 RHOBTB2Q9BYZ6 727 aa15.52■□□□□ 0.08
SNRNP200-205ENST00000480835 ULBP1Q9BZM6 244 aa15.52■□□□□ 0.08
SNRNP200-205ENST00000480835 DDX56Q9NY93 547 aaKnown RBP15.52■□□□□ 0.08
SNRNP200-205ENST00000480835 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.52■□□□□ 0.08
SNRNP200-205ENST00000480835 USTQ9Y2C2 406 aa15.52■□□□□ 0.08
SNRNP200-205ENST00000480835 SSX2IPQ9Y2D8 614 aa15.52■□□□□ 0.08
SNRNP200-205ENST00000480835 RWDD3Q9Y3V2 267 aa15.52■□□□□ 0.08
SNRNP200-205ENST00000480835 NR2E3Q9Y5X4 410 aa15.52■□□□□ 0.08
SNRNP200-205ENST00000480835 MTMR11A4FU01 709 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 PGRMC1O00264 195 aaKnown RBP15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 TLL1O43897 1013 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 ZBED1O96006 694 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 URODP06132 367 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 GTF2F1P35269 517 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 FLT3P36888 993 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 SSR1P43307 286 aaKnown RBP15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 YWHAZP63104 245 aaKnown RBP15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 TPGS2Q68CL5 300 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 PM20D1Q6GTS8 502 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 PRSS55Q6UWB4 352 aaPredicted RBP15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 CPNE8Q86YQ8 564 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 KATNAL2Q8IYT4 538 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 CLEC4CQ8WTT0 213 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 FAM149B1Q96BN6 582 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 DDX23Q9BUQ8 820 aaKnown RBP15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 POPDC2Q9HBU9 364 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 COMMD8Q9NX08 183 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 RRN3Q9NYV6 651 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 CDY1Q9Y6F8 540 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 USP3Q9Y6I4 520 aa15.51■□□□□ 0.07
SNRNP200-205ENST00000480835 EFCAB8A8MWE9 144 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 TNFRSF10BO14763 440 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 GRAP2O75791 330 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 KRT7P08729 469 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 NOS2P35228 1153 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 CETN2P41208 172 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 MATKP42679 507 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 ARPP19P56211 112 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 TAS2R40P59535 323 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 RPL10AP62906 217 aaKnown RBP15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 TAF5Q15542 800 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 CCDC14Q49A88 953 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 TRNP1Q6NT89 227 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 BEND5Q7L4P6 421 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 GPRIN1Q7Z2K8 1008 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 SCN4BQ8IWT1 228 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 GOLGA1Q92805 767 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 SPATA17Q96L03 361 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 SLC2A13Q96QE2 648 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 FNIP2Q9P278 1114 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 HSFX1Q9UBD0 423 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 AFF4Q9UHB7 1163 aaKnown RBP15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 MAFFQ9ULX9 164 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 STAP1Q9ULZ2 295 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 PLXNA3P51805 1871 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 MYO16Q9Y6X6 1858 aa15.5■□□□□ 0.07
SNRNP200-205ENST00000480835 GREB1Q4ZG55 1949 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 PDE2AO00408 941 aaPredicted RBP15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 LRCH4O75427 683 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 TADA3O75528 432 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 FGF18O76093 207 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 RTN3O95197 1032 aaPredicted RBP15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 LTFP02788 710 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 LINC00271P0C7V0 271 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 HAPLN1P10915 354 aaPredicted RBP15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 OR1D2P34982 312 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 MARCKSL1P49006 195 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 NDUFV1P49821 464 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 COPS2P61201 443 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 ROR1Q01973 937 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 DCAF12L1Q5VU92 463 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 RSPO2Q6UXX9 243 aaPredicted RBP15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 RNF19BQ6ZMZ0 732 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 STRADAQ7RTN6 431 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 RCOR2Q8IZ40 523 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 VPS52Q8N1B4 723 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 NUP93Q8N1F7 819 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 ATAD1Q8NBU5 361 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 EXD1Q8NHP7 514 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 CENPIQ92674 756 aaPredicted RBP15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 RBM41Q96IZ5 413 aaKnown RBP15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 MS4A14Q96JA4 679 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 RNPC3Q96LT9 517 aaKnown RBP15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 PGLYRP2Q96PD5 576 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 CLSTN3Q9BQT9 956 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 FBXO44Q9H4M3 255 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 MRPL17Q9NRX2 175 aaKnown RBP15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 TMEM51Q9NW97 253 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 PCDH10Q9P2E7 1040 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 LZTS1Q9Y250 596 aa15.49■□□□□ 0.07
SNRNP200-205ENST00000480835 PLXNA4Q9HCM2 1894 aa15.48■□□□□ 0.07
SNRNP200-205ENST00000480835 COL4A4P53420 1690 aaPredicted RBP15.48■□□□□ 0.07
SNRNP200-205ENST00000480835 ZNF638Q14966 1978 aaKnown RBP15.48■□□□□ 0.07
SNRNP200-205ENST00000480835 WDR27A2RRH5 827 aa15.48■□□□□ 0.07
SNRNP200-205ENST00000480835 CTIFO43310 598 aaKnown RBP15.48■□□□□ 0.07
SNRNP200-205ENST00000480835 ZRANB2O95218 330 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNRNP200-205ENST00000480835 USP17L7P0C7H9 530 aa15.48■□□□□ 0.07
SNRNP200-205ENST00000480835 CTSAP10619 480 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms