RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 COL4A3Q01955 1670 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 CILPO75339 1184 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 RETP07949 1114 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 PRKCSHP14314 528 aaPredicted RBP12.11□□□□□ -0.47
CCM2-213ENST00000480658 CDR1P51861 262 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 CDH8P55286 799 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 USP46P62068 366 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 SATB1Q01826 763 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 IFRD2Q12894 506 aaPredicted RBP12.11□□□□□ -0.47
CCM2-213ENST00000480658 SIM2Q14190 667 aaPredicted RBP12.11□□□□□ -0.47
CCM2-213ENST00000480658 BTBD8Q5XKL5 378 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 TRMT11Q7Z4G4 463 aaKnown RBP12.11□□□□□ -0.47
CCM2-213ENST00000480658 TTC16Q8NEE8 873 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 TTC8Q8TAM2 541 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 CEP63Q96MT8 703 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 CYP2S1Q96SQ9 504 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.11□□□□□ -0.472e-6■■■■■ 102.1
CCM2-213ENST00000480658 RAB20Q9NX57 234 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 ARMCX3Q9UH62 379 aaPredicted RBP12.11□□□□□ -0.47
CCM2-213ENST00000480658 MAPK8IP1Q9UQF2 711 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 WNT6Q9Y6F9 365 aa12.11□□□□□ -0.47
CCM2-213ENST00000480658 TNFRSF10BO14763 440 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 TLR5O60602 858 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 RNF40O75150 1001 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 FGFR1OPO95684 399 aaKnown RBP12.1□□□□□ -0.47
CCM2-213ENST00000480658 GNA14O95837 355 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 ZDHHC11BP0C7U3 371 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 ARSAP15289 507 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 RAP1GAPP47736 663 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 GAD2Q05329 585 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 PNOCQ13519 176 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 PUM1Q14671 1186 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCM2-213ENST00000480658 CCDC142Q17RM4 750 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 TCERG1LQ5VWI1 586 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 SCARA3Q6AZY7 606 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 FSTL4Q6MZW2 842 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 TSSK4Q6SA08 328 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 Q6ZS52 159 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 CEP68Q76N32 757 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 FILIP1Q7Z7B0 1213 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 GPIHBP1Q8IV16 184 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 ZNF276Q8N554 614 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 TAS1R2Q8TE23 839 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 CYFIP2Q96F07 1278 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 SLC22A12Q96S37 553 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 UBXN6Q9BZV1 441 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 GDPD2Q9HCC8 539 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 CYLDQ9NQC7 956 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 KIAA1257Q9ULG3 409 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 SCML2Q9UQR0 700 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 ZNF510Q9Y2H8 683 aa12.1□□□□□ -0.47
CCM2-213ENST00000480658 GREB1Q4ZG55 1949 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 K7ESF4 209 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 CLDN5O00501 218 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 PMM2O15305 246 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 P4HA2O15460 535 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 COCHO43405 550 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 ALDH1A2O94788 518 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 APBB3O95704 486 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 APODP05090 189 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 TRIM49P0CI25 452 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 TRIM49CP0CI26 452 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 RALAP11233 206 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 ADH5P11766 374 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 CCDC130P13994 396 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 ATP5C1P36542 298 aaKnown RBP12.09□□□□□ -0.47
CCM2-213ENST00000480658 PRCPP42785 496 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 GALK1P51570 392 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 MAP3K7CLP57077 242 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 MRPS21P82921 87 aaKnown RBP12.09□□□□□ -0.47
CCM2-213ENST00000480658 PPP3CAQ08209 521 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 GAS6Q14393 721 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 DCAF17Q5H9S7 520 aaPredicted RBP12.09□□□□□ -0.47
CCM2-213ENST00000480658 C1orf220Q5T0J3 134 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 PRR23BQ6ZRT6 265 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 CCDC186Q7Z3E2 898 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 CACNA2D4Q7Z3S7 1137 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 ZC3H3Q8IXZ2 948 aaKnown RBP12.09□□□□□ -0.47
CCM2-213ENST00000480658 ADGRG2Q8IZP9 1017 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 ENGASEQ8NFI3 743 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 GAB3Q8WWW8 586 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 TMEM176AQ96HP8 235 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 KCNK16Q96T55 309 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 PNKPQ96T60 521 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 DUSP16Q9BY84 665 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 MMRN2Q9H8L6 949 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 RBM12Q9NTZ6 932 aaKnown RBP12.09□□□□□ -0.47
CCM2-213ENST00000480658 CLIC5Q9NZA1 410 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 CFAP97Q9P2B7 532 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 EBF1Q9UH73 591 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 NME7Q9Y5B8 376 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 PCDHGA5Q9Y5G8 931 aa12.09□□□□□ -0.47
CCM2-213ENST00000480658 OTOL1A6NHN0 477 aaPredicted RBP12.08□□□□□ -0.48
CCM2-213ENST00000480658 ZBTB24O43167 697 aaPredicted RBP12.08□□□□□ -0.48
CCM2-213ENST00000480658 RPP40O75818 363 aaKnown RBP12.08□□□□□ -0.48
CCM2-213ENST00000480658 EGFP01133 1207 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 CYP17A1P05093 508 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 CCDC192P0DO97 292 aa12.08□□□□□ -0.48
CCM2-213ENST00000480658 CD58P19256 250 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms