RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 PABPC3Q9H361 631 aaKnown RBP4.18□□□□□ -1.74
NF1-209ENST00000479536 TP63Q9H3D4 680 aaPredicted RBP4.18□□□□□ -1.74
NF1-209ENST00000479536 SAYSD1Q9NPB0 183 aa4.18□□□□□ -1.74
NF1-209ENST00000479536 GGA3Q9NZ52 723 aa4.18□□□□□ -1.74
NF1-209ENST00000479536 TMOD4Q9NZQ9 345 aa4.18□□□□□ -1.74
NF1-209ENST00000479536 IFT80Q9P2H3 777 aaPredicted RBP4.18□□□□□ -1.74
NF1-209ENST00000479536 HPSEQ9Y251 543 aa4.18□□□□□ -1.74
NF1-209ENST00000479536 RAD54BQ9Y620 910 aa4.18□□□□□ -1.74
NF1-209ENST00000479536 KAT6BQ8WYB5 2073 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 B9A039 149 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 PCDH17O14917 1159 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 DNPH1O43598 174 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 RGS10O43665 173 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 NTSR2O95665 410 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 CENPBP07199 599 aaPredicted RBP4.17□□□□□ -1.74
NF1-209ENST00000479536 SPATA31D3P0C874 917 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 KCNA3P22001 575 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 SLC5A2P31639 672 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 MAN1A1P33908 653 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 PTGS2P35354 604 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 ADD2P35612 726 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 SCNN1GP51170 649 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 DGKEP52429 567 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 ALDH18A1P54886 795 aaKnown RBP4.17□□□□□ -1.74
NF1-209ENST00000479536 AP2B1P63010 937 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 MYO1EQ12965 1108 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 FAM110CQ1W6H9 321 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 DCAF17Q5H9S7 520 aaPredicted RBP4.17□□□□□ -1.74
NF1-209ENST00000479536 AGAP9Q5VTM2 703 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 TSHZ3Q63HK5 1081 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 SPATA31D4Q6ZUB0 917 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 LRRTM4Q86VH4 590 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 TICAM2Q86XR7 235 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 C2CD5Q86YS7 1000 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 TMTC1Q8IUR5 882 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 RASGRP3Q8IV61 690 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 RHOT2Q8IXI1 618 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 COLGALT2Q8IYK4 626 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 SIMC1Q8NDZ2 872 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 SLC30A5Q8TAD4 765 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 NTN5Q8WTR8 489 aaPredicted RBP4.17□□□□□ -1.74
NF1-209ENST00000479536 PPP2R3CQ969Q6 453 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 FAM227BQ96M60 508 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 SEC62Q99442 399 aaKnown RBP4.17□□□□□ -1.74
NF1-209ENST00000479536 NEU1Q99519 415 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 RTKNQ9BST9 563 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 DDX23Q9BUQ8 820 aaKnown RBP4.17□□□□□ -1.74
NF1-209ENST00000479536 SLC25A32Q9H2D1 315 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 SMOC2Q9H3U7 446 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 EPS8L2Q9H6S3 715 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 RIC8AQ9NPQ8 531 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 PRDM8Q9NQV8 689 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 HELLSQ9NRZ9 838 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 CTTNBP2NLQ9P2B4 639 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 HSFX1Q9UBD0 423 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 LPAR3Q9UBY5 353 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 SWAP70Q9UH65 585 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 FEM1BQ9UK73 627 aa4.17□□□□□ -1.74
NF1-209ENST00000479536 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.17□□□□□ -1.74
NF1-209ENST00000479536 TISP43B9A030 160 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 hCG_1984214I3L0E3 225 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 LEFTY2O00292 366 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 CCNT2O60583 730 aaKnown RBP4.16□□□□□ -1.74
NF1-209ENST00000479536 SRGAP2O75044 1071 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 SOAT2O75908 522 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 VIPP01282 170 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 FAM163BP0C2L3 166 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 SRGAP2BP0DMP2 458 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 ARP10275 920 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 CASP2P42575 452 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 PRKAG1P54619 331 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 PRKAA2P54646 552 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 NHLH2Q02577 135 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 SCAPQ12770 1279 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 FOXD4Q12950 439 aaPredicted RBP4.16□□□□□ -1.74
NF1-209ENST00000479536 GPS1Q13098 491 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 CUL4BQ13620 913 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 ATP1A4Q13733 1029 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 EFR3AQ14156 821 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 PTCHD3Q3KNS1 767 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 FAM102AQ5T9C2 384 aaPredicted RBP4.16□□□□□ -1.74
NF1-209ENST00000479536 RETSATQ6NUM9 610 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 TMEM108Q6UXF1 575 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.16□□□□□ -1.74
NF1-209ENST00000479536 Q6ZRM9 215 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 RSRC2Q7L4I2 434 aaKnown RBP4.16□□□□□ -1.74
NF1-209ENST00000479536 MRGPREQ86SM8 312 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 PRIMA1Q86XR5 153 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 VRK3Q8IV63 474 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 HERC6Q8IVU3 1022 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 SLC44A2Q8IWA5 706 aaPredicted RBP4.16□□□□□ -1.74
NF1-209ENST00000479536 NME8Q8N427 588 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 ESX1Q8N693 406 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 OR56A1Q8NGH5 318 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 SCAMP5Q8TAC9 235 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 THAP4Q8WY91 577 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 HAS1Q92839 578 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 MIEF2Q96C03 454 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 GRAMD1AQ96CP6 724 aa4.16□□□□□ -1.74
NF1-209ENST00000479536 MED15Q96RN5 788 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms