RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 ATP1A3P13637 1013 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 UCHL3P15374 230 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 GDI1P31150 447 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 PLA2G4AP47712 749 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 PSEN1P49768 467 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 TUBP50607 506 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 BPIFB4P59827 614 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 PTK2Q05397 1052 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 IQCB1Q15051 598 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 SNX30Q5VWJ9 437 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 UBA3Q8TBC4 463 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 USP13Q92995 863 aaPredicted RBP21.59■■□□□ 1.05
VARS-224ENST00000479051 SMG9Q9H0W8 520 aaKnown RBP21.59■■□□□ 1.05
VARS-224ENST00000479051 CBX8Q9HC52 389 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 FHOD1Q9Y613 1164 aa21.59■■□□□ 1.05
VARS-224ENST00000479051 ZDHHC11BP0C7U3 371 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 PLCB2Q00722 1185 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 DRAP1Q14919 205 aaPredicted RBP21.58■■□□□ 1.05
VARS-224ENST00000479051 MEA1Q16626 185 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 ARHGAP29Q52LW3 1261 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 CC2D1AQ6P1N0 951 aaPredicted RBP21.58■■□□□ 1.05
VARS-224ENST00000479051 CCDC186Q7Z3E2 898 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 TADA2BQ86TJ2 420 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 SIX6OS1Q8N1H7 587 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 ARHGAP18Q8N392 663 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 DNASE1L2Q92874 299 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 NACA2Q9H009 215 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 MFSD1Q9H3U5 465 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 FAM207AQ9NSI2 230 aaPredicted RBP21.58■■□□□ 1.05
VARS-224ENST00000479051 ARHGAP26Q9UNA1 814 aa21.58■■□□□ 1.05
VARS-224ENST00000479051 FAM86C2PA6NEL3 165 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 PRR33A8MZF0 331 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 CHADO15335 359 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 CYP26A1O43174 497 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 OAS1P00973 400 aaKnown RBP21.57■■□□□ 1.04
VARS-224ENST00000479051 TKTL1P51854 596 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 SLC7A9P82251 487 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 FCHO2Q0JRZ9 810 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 SYCP1Q15431 976 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 PKDCCQ504Y2 493 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 RAB41Q5JT25 222 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 DPY19L2P1Q6NXN4 242 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 LUZP1Q86V48 1076 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 NEK11Q8NG66 645 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 ZNF606Q8WXB4 792 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 KCTD13Q8WZ19 329 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 SECISBP2LQ93073 1101 aaKnown RBP21.57■■□□□ 1.04
VARS-224ENST00000479051 PBXIP1Q96AQ6 731 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 RSPRY1Q96DX4 576 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 ASIC4Q96FT7 647 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 SLC22A12Q96S37 553 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 CYP2S1Q96SQ9 504 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 ZSWIM1Q9BR11 485 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 STK33Q9BYT3 514 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 AJAP1Q9UKB5 411 aaPredicted RBP21.57■■□□□ 1.04
VARS-224ENST00000479051 USP3Q9Y6I4 520 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 MUC3AQ02505 3323 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 ANAPC1Q9H1A4 1944 aa21.57■■□□□ 1.04
VARS-224ENST00000479051 FOXN3O00409 490 aaPredicted RBP21.56■■□□□ 1.04
VARS-224ENST00000479051 OLFM2O95897 454 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 SERPINC1P01008 464 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 CALCAP01258 141 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 MBL2P11226 248 aaPredicted RBP21.56■■□□□ 1.04
VARS-224ENST00000479051 RALAP11233 206 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 APTXQ7Z2E3 356 aaKnown RBP21.56■■□□□ 1.04
VARS-224ENST00000479051 BMP8AQ7Z5Y6 402 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 DDX42Q86XP3 938 aaKnown RBP eCLIP21.56■■□□□ 1.04
VARS-224ENST00000479051 FAM71AQ8IYT1 594 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 SIX5Q8N196 739 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 CSGALNACT1Q8TDX6 532 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 SHDQ96IW2 340 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 HSFY1Q96LI6 401 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 ERGIC2Q96RQ1 377 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 CDK5RAP1Q96SZ6 601 aaKnown RBP21.56■■□□□ 1.04
VARS-224ENST00000479051 NAA15Q9BXJ9 866 aaKnown RBP21.56■■□□□ 1.04
VARS-224ENST00000479051 ARHGEF3Q9NR81 526 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 NAGPAQ9UK23 515 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 CA14Q9ULX7 337 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 CCL26Q9Y258 94 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 SIK3Q9Y2K2 1263 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 MYO16Q9Y6X6 1858 aa21.56■■□□□ 1.04
VARS-224ENST00000479051 TLR5O60602 858 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 ZBED1O96006 694 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 TCF3P15923 654 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 POLR2FP61218 127 aaKnown RBP21.55■■□□□ 1.04
VARS-224ENST00000479051 ADIGQ0VDE8 80 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 TTC16Q8NEE8 873 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 SH3RF2Q8TEC5 729 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 SLC35F5Q8WV83 523 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 SPAG5Q96R06 1193 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 GANQ9H2C0 597 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 TSPY26PQ9H489 355 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 C11orf16Q9NQ32 467 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 TRPV5Q9NQA5 729 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 CPQQ9Y646 472 aa21.55■■□□□ 1.04
VARS-224ENST00000479051 A0A1W2PQH9 124 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 TULP2O00295 520 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 COCHO43405 550 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 KRT9P35527 623 aa21.54■■□□□ 1.04
VARS-224ENST00000479051 KLK7P49862 253 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms