RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 STK24Q9Y6E0 443 aa10.24□□□□□ -0.77
COL13A1-207ENST00000478219 ARHGAP10A1A4S6 786 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 KLF11O14901 512 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 FBXO21O94952 628 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 TNFAIP8O95379 198 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 KRT5P13647 590 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 ITGAXP20702 1163 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 RPL10P27635 214 aaKnown RBP10.23□□□□□ -0.77
COL13A1-207ENST00000478219 DSG3P32926 999 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 CYTH1Q15438 398 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 CCDC92Q53HC0 331 aaPredicted RBP10.23□□□□□ -0.77
COL13A1-207ENST00000478219 HSP90AA5PQ58FG0 334 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 ZFYVE27Q5T4F4 411 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 ANO5Q75V66 913 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 RSPH3Q86UC2 560 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 RHOT1Q8IXI2 618 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 PALM2Q8IXS6 379 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 LILRA2Q8N149 483 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 AHI1Q8N157 1196 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 PQLC1Q8N2U9 271 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 LZTR1Q8N653 840 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 DEPTORQ8TB45 409 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 HSD17B14Q9BPX1 270 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 C11orf70Q9BRQ4 267 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 RRN3Q9NYV6 651 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 RSL24D1Q9UHA3 163 aaKnown RBP10.23□□□□□ -0.77
COL13A1-207ENST00000478219 SHOC2Q9UQ13 582 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 MYPNQ86TC9 1320 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 TCRBV9S1A1TA0A576 114 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 I3L4J1 428 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 XPO1O14980 1071 aaKnown RBP10.23□□□□□ -0.77
COL13A1-207ENST00000478219 ATP2A1O14983 1001 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 UGT1A9O60656 530 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 FUCA1P04066 466 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 HOXA13P31271 388 aaPredicted RBP10.23□□□□□ -0.77
COL13A1-207ENST00000478219 ATXN3P54252 364 aaPredicted RBP10.23□□□□□ -0.77
COL13A1-207ENST00000478219 HDAC4P56524 1084 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 PPP4CP60510 307 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 IRX4P78413 519 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 USH1GQ495M9 461 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 CIAPIN1Q6FI81 312 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 PACS1Q6VY07 963 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 FRMD7Q6ZUT3 714 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 MAVSQ7Z434 540 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 ERI1Q8IV48 349 aaKnown RBP10.23□□□□□ -0.77
COL13A1-207ENST00000478219 ACTRT2Q8TDY3 377 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 TAS1R2Q8TE23 839 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 TFB1MQ8WVM0 346 aaKnown RBP10.23□□□□□ -0.77
COL13A1-207ENST00000478219 SLITRK1Q96PX8 696 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 UGT1A7Q9HAW7 530 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 UGT1A10Q9HAW8 530 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 UGT1A8Q9HAW9 530 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 SLC38A7Q9NVC3 462 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 SNCAIPQ9Y6H5 919 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 CROCCQ5TZA2 2017 aa10.23□□□□□ -0.77
COL13A1-207ENST00000478219 FUOMA2VDF0 154 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 CXorf49A8MYA2 514 aaPredicted RBP10.22□□□□□ -0.77
COL13A1-207ENST00000478219 TRIM49D1C9J1S8 452 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 COPEO14579 308 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 TBC1D12O60347 775 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 AVILO75366 819 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 STAMBPO95630 424 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 PHBP35232 272 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 CRKLP46109 303 aaKnown RBP10.22□□□□□ -0.77
COL13A1-207ENST00000478219 NR1H2P55055 460 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 RPL7AP62424 266 aaKnown RBP10.22□□□□□ -0.77
COL13A1-207ENST00000478219 DYNLT1P63172 113 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 PTP4A2Q12974 167 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 BMPR2Q13873 1038 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 SHROOM1Q2M3G4 852 aaPredicted RBP10.22□□□□□ -0.77
COL13A1-207ENST00000478219 KLHL38Q2WGJ6 581 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 USP41Q3LFD5 358 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 VWA5B1Q5TIE3 1220 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 BORAQ6PGQ7 559 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 CBWD2Q8IUF1 395 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 SLC9A9Q8IVB4 645 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 RTKN2Q8IZC4 609 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 NAT8LQ8N9F0 302 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 EXD1Q8NHP7 514 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 RANBP9Q96S59 729 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 SENP7Q9BQF6 1050 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 NEURL2Q9BR09 285 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 SH2D3AQ9BRG2 576 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 STRA6Q9BX79 667 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 PPCSQ9HAB8 311 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 ZNF287Q9HBT7 754 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 FETUBQ9UGM5 382 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 IRS2Q9Y4H2 1338 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 SPTLC1O15269 473 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 PSTPIP1O43586 416 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 FAM58BPP0C7Q3 252 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 ELK3P41970 407 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 COPAP53621 1224 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 MFAP3P55082 362 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 RPL26P61254 145 aaKnown RBP10.22□□□□□ -0.77
COL13A1-207ENST00000478219 CETN1Q12798 172 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 DCAF6Q58WW2 860 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 OGFOD2Q6N063 350 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 LPCAT2Q7L5N7 544 aa10.22□□□□□ -0.77
COL13A1-207ENST00000478219 FASTKD5Q7L8L6 764 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms