RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 TCEAL4Q96EI5 215 aa21■□□□□ 0.95
ACTB-210ENST00000477812 PPP1R13BQ96KQ4 1090 aa21■□□□□ 0.95
ACTB-210ENST00000477812 ULBP1Q9BZM6 244 aa21■□□□□ 0.95
ACTB-210ENST00000477812 FBXO44Q9H4M3 255 aa21■□□□□ 0.95
ACTB-210ENST00000477812 LRRC4Q9HBW1 653 aa21■□□□□ 0.95
ACTB-210ENST00000477812 ZNHIT6Q9NWK9 470 aaKnown RBP21■□□□□ 0.95
ACTB-210ENST00000477812 UXTQ9UBK9 157 aaPredicted RBP21■□□□□ 0.95
ACTB-210ENST00000477812 CLUHO75153 1309 aa21■□□□□ 0.95
ACTB-210ENST00000477812 OBSL1O75147 1896 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 PAPSS1O43252 624 aaPredicted RBP20.99■□□□□ 0.95
ACTB-210ENST00000477812 MBTPS2O43462 519 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 ERBB2P04626 1255 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 TNFAIP3P21580 790 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 MMP8P22894 467 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 EIF4A3P38919 411 aaKnown RBP20.99■□□□□ 0.95
ACTB-210ENST00000477812 MTHFRP42898 656 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 ACADSBP45954 432 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 GABRB2P47870 512 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 PGFP49763 221 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 PTP4A2Q12974 167 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 ATAT1Q5SQI0 421 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 PHF13Q86YI8 300 aaPredicted RBP20.99■□□□□ 0.95
ACTB-210ENST00000477812 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.99■□□□□ 0.95
ACTB-210ENST00000477812 SHKBP1Q8TBC3 707 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 OVCA2Q8WZ82 227 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 PDLIM2Q96JY6 352 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 RIPOR3Q96MK2 946 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 NOX5Q96PH1 765 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 CNGB3Q9NQW8 809 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 TAS2R14Q9NYV8 317 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 GMIPQ9P107 970 aa20.99■□□□□ 0.95
ACTB-210ENST00000477812 C5orf42Q9H799 3197 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 A0A087X0T9 212 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 PIK3R2O00459 728 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 ZBED1O96006 694 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 USP17L7P0C7H9 530 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 FAM228BP0C875 321 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 MYL4P12829 197 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 GABRR2P28476 465 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 DAOAP59103 153 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 TFF2Q03403 129 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 IFRD2Q12894 506 aaPredicted RBP20.98■□□□□ 0.95
ACTB-210ENST00000477812 CBX2Q14781 532 aaPredicted RBP20.98■□□□□ 0.95
ACTB-210ENST00000477812 TAF12Q16514 161 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 TSR1Q2NL82 804 aaKnown RBP20.98■□□□□ 0.95
ACTB-210ENST00000477812 CYP4A22Q5TCH4 519 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 POTEHQ6S545 545 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 PDZD4Q76G19 769 aaPredicted RBP20.98■□□□□ 0.95
ACTB-210ENST00000477812 SCD5Q86SK9 330 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 TMEM139Q8IV31 216 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 SIX6OS1Q8N1H7 587 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 ITFG1Q8TB96 612 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 FBXO32Q969P5 355 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 NECTIN4Q96NY8 510 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 POMKQ9H5K3 350 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 ST7Q9NRC1 585 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 SEPT11Q9NVA2 429 aaKnown RBP20.98■□□□□ 0.95
ACTB-210ENST00000477812 ADAMTS1Q9UHI8 967 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 MYO16Q9Y6X6 1858 aa20.98■□□□□ 0.95
ACTB-210ENST00000477812 A0A1W2PRU2 124 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 FAM170AA1A519 330 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 ZNF840PA6NDX5 716 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 FGF19O95750 216 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 GZMAP12544 262 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 LCP1P13796 627 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 CDC25CP30307 473 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 SNX30Q5VWJ9 437 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 ACAD10Q6JQN1 1059 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 MON1BQ7L1V2 547 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 SCUBE3Q8IX30 993 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 CLEC4CQ8WTT0 213 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 NDRG1Q92597 394 aaKnown RBP20.97■□□□□ 0.95
ACTB-210ENST00000477812 PIWIL1Q96J94 861 aaKnown RBP20.97■□□□□ 0.95
ACTB-210ENST00000477812 SLITRK1Q96PX8 696 aa20.97■□□□□ 0.95
ACTB-210ENST00000477812 DENND4CQ5VZ89 1909 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 FBXO21O94952 628 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 GJA1P17302 382 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 CEBPBP17676 345 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 FSHRP23945 695 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 NSFP46459 744 aaKnown RBP20.96■□□□□ 0.95
ACTB-210ENST00000477812 GSDMDP57764 484 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 OLFML1Q6UWY5 402 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 MMS22LQ6ZRQ5 1243 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 VPS36Q86VN1 386 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 ERICH1Q86X53 443 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 PDZD8Q8NEN9 1154 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 IPO4Q8TEX9 1081 aaKnown RBP20.96■□□□□ 0.95
ACTB-210ENST00000477812 IRGQQ8WZA9 623 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 MIS12Q9H081 205 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 NHEJ1Q9H9Q4 299 aaPredicted RBP20.96■□□□□ 0.95
ACTB-210ENST00000477812 NMUR1Q9HB89 426 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 OSER1Q9NX31 292 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 MRPS23Q9Y3D9 190 aaKnown RBP20.96■□□□□ 0.95
ACTB-210ENST00000477812 ANAPC1Q9H1A4 1944 aa20.96■□□□□ 0.95
ACTB-210ENST00000477812 DOCK8Q8NF50 2099 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 YJEFN3A6XGL0 299 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 E7ENQ6 273 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 ZNF197O14709 1029 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 PPP3CCP48454 512 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 MRPS5P82675 430 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms