RNA–Protein interactions for RNA: ENST00000477772.1

COL11A2-206, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 2

Gene COL11A2, Length 1,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-206ENST00000477772 SNX9Q9Y5X1 595 aa17.05■□□□□ 0.32
COL11A2-206ENST00000477772 TSC2P49815 1807 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 EPOPA6NHQ4 379 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 M0QZQ0 153 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 FAM107AO95990 144 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 CPP00450 1065 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 PYGMP11217 842 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 COILP38432 576 aaPredicted RBP17.04■□□□□ 0.32
COL11A2-206ENST00000477772 SLC1A1P43005 524 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 PPP1R2P3Q6NXS1 205 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 CCDC137Q6PK04 289 aaKnown RBP17.04■□□□□ 0.32
COL11A2-206ENST00000477772 NLRP14Q86W24 1093 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 TLCD1Q96CP7 247 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 GRHL1Q9NZI5 618 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 CNOT8Q9UFF9 292 aaKnown RBP17.04■□□□□ 0.32
COL11A2-206ENST00000477772 SF3B1O75533 1304 aaKnown RBP eCLIP17.04■□□□□ 0.32
COL11A2-206ENST00000477772 CARNS1A5YM72 827 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 CYB561D2O14569 222 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 RB1P06400 928 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 DNAJB1P25685 340 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 HPDP32754 393 aaPredicted RBP17.04■□□□□ 0.32
COL11A2-206ENST00000477772 SLMAPQ14BN4 828 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 SOWAHAQ2M3V2 549 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 WDR44Q5JSH3 913 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 FAM171A1Q5VUB5 890 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 DENND2CQ68D51 928 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 LIMS2Q7Z4I7 341 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 DDX53Q86TM3 631 aaKnown RBP17.04■□□□□ 0.32
COL11A2-206ENST00000477772 ARNTL2Q8WYA1 636 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 SAMD11Q96NU1 681 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 IMPG2Q9BZV3 1241 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 LRRC19Q9H756 370 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 SNX24Q9Y343 169 aa17.04■□□□□ 0.32
COL11A2-206ENST00000477772 TIMM13Q9Y5L4 95 aaPredicted RBP17.04■□□□□ 0.32
COL11A2-206ENST00000477772 ATMINO43313 823 aaPredicted RBP17.03■□□□□ 0.32
COL11A2-206ENST00000477772 UNGP13051 313 aaPredicted RBP17.03■□□□□ 0.32
COL11A2-206ENST00000477772 KRT5P13647 590 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 MAN1A1P33908 653 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 ASPAP45381 313 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 PLTPP55058 493 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 BYSLQ13895 437 aaKnown RBP17.03■□□□□ 0.32
COL11A2-206ENST00000477772 ODF2Q5BJF6 829 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 ZNF667Q5HYK9 610 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 DSTYKQ6XUX3 929 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 TRIM72Q6ZMU5 477 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 SYDE1Q6ZW31 735 aaPredicted RBP17.03■□□□□ 0.32
COL11A2-206ENST00000477772 YTHDF3Q7Z739 585 aaKnown RBP17.03■□□□□ 0.32
COL11A2-206ENST00000477772 MYCBPAPQ8TBZ2 947 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 SPPL3Q8TCT6 385 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 ZNF473Q8WTR7 871 aaKnown RBP17.03■□□□□ 0.32
COL11A2-206ENST00000477772 PGM2Q96G03 612 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 LRCH3Q96II8 777 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 TMEM109Q9BVC6 243 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 SDCBP2Q9H190 292 aa17.03■□□□□ 0.32
COL11A2-206ENST00000477772 FSCN2O14926 492 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 GRM6O15303 877 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 TRAPPC3O43617 180 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 FGFR3P22607 806 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 TKTP29401 623 aaKnown RBP17.02■□□□□ 0.32
COL11A2-206ENST00000477772 RPL21P46778 160 aaKnown RBP17.02■□□□□ 0.32
COL11A2-206ENST00000477772 CDH8P55286 799 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 CAMK1Q14012 370 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 SIX1Q15475 284 aaPredicted RBP17.02■□□□□ 0.32
COL11A2-206ENST00000477772 RTP2Q5QGT7 225 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 AADACL2Q6P093 401 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 TTC27Q6P3X3 843 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 TADA2BQ86TJ2 420 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 FBXO22Q8NEZ5 403 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 FBXO25Q8TCJ0 367 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 CCT8L2Q96SF2 557 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 C11orf84Q9BUA3 381 aaPredicted RBP17.02■□□□□ 0.32
COL11A2-206ENST00000477772 EPB41L4BQ9H329 900 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 SMYD3Q9H7B4 428 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 ACP6Q9NPH0 428 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 CHST7Q9NS84 486 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 NOVA2Q9UNW9 492 aaKnown RBP17.02■□□□□ 0.32
COL11A2-206ENST00000477772 MYO7AQ13402 2215 aa17.02■□□□□ 0.32
COL11A2-206ENST00000477772 H3BNC9 293 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 SOD2P04179 222 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 PAX3P23760 479 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 RAP1GAPP47736 663 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 KRT17Q04695 432 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 PTP4A2Q12974 167 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 WSCD1Q658N2 575 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 SMYD5Q6GMV2 418 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 SCARA5Q6ZMJ2 495 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 CCDC105Q8IYK2 499 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 MCOLN2Q8IZK6 566 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 ZDHHC14Q8IZN3 488 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 VPS52Q8N1B4 723 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 CENPTQ96BT3 561 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 NIF3L1Q9GZT8 377 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 TTYH1Q9H313 450 aaPredicted RBP17.02■□□□□ 0.31
COL11A2-206ENST00000477772 ZNF576Q9H609 170 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 BCCIPQ9P287 314 aaKnown RBP eCLIP17.02■□□□□ 0.31
COL11A2-206ENST00000477772 PCDHB8Q9UN66 801 aa17.02■□□□□ 0.31
COL11A2-206ENST00000477772 COL4A4P53420 1690 aaPredicted RBP17.01■□□□□ 0.31
COL11A2-206ENST00000477772 RFXAPO00287 272 aa17.01■□□□□ 0.31
COL11A2-206ENST00000477772 KIAA0754O94854 1291 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms