RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 XYLT2Q9H1B5 865 aa12.3□□□□□ -0.44
LSM2-212ENST00000477182 APOBEC3GQ9HC16 384 aaKnown RBP12.3□□□□□ -0.44
LSM2-212ENST00000477182 SIX2Q9NPC8 291 aa12.3□□□□□ -0.44
LSM2-212ENST00000477182 FAM207AQ9NSI2 230 aaPredicted RBP12.3□□□□□ -0.44
LSM2-212ENST00000477182 C2orf42Q9NWW7 574 aa12.3□□□□□ -0.44
LSM2-212ENST00000477182 SLC8A2Q9UPR5 921 aa12.3□□□□□ -0.44
LSM2-212ENST00000477182 GPSM3Q9Y4H4 160 aa12.3□□□□□ -0.44
LSM2-212ENST00000477182 IGSF10Q6WRI0 2623 aa12.3□□□□□ -0.44
LSM2-212ENST00000477182 LNP1A1A4G5 178 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 HEPACAM2A8MVW5 462 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 EPHB6O15197 1021 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 HYAL3O43820 417 aaPredicted RBP12.29□□□□□ -0.44
LSM2-212ENST00000477182 B3GAT3O94766 335 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 ATICP31939 592 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 CTHP32929 405 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 VIPR2P41587 438 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 TAF6P49848 677 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 CREB5Q02930 508 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 MYO1EQ12965 1108 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 SV2CQ496J9 727 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 ZNF667Q5HYK9 610 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 KLHDC7AQ5VTJ3 777 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 GJB7Q6PEY0 223 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 VSTM4Q8IW00 320 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 CAMKK1Q8N5S9 505 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 C3orf58Q8NDZ4 430 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 NEK11Q8NG66 645 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 ZNF461Q8TAF7 563 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 ZSCAN18Q8TBC5 510 aaPredicted RBP12.29□□□□□ -0.44
LSM2-212ENST00000477182 SLC32A1Q9H598 525 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 PLCB1Q9NQ66 1216 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 NXF1Q9UBU9 619 aaKnown RBP12.29□□□□□ -0.44
LSM2-212ENST00000477182 NUB1Q9Y5A7 615 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 EML5Q05BV3 1969 aa12.29□□□□□ -0.44
LSM2-212ENST00000477182 BCLAF3A2AJT9 711 aaKnown RBP12.28□□□□□ -0.44
LSM2-212ENST00000477182 NRG2O14511 850 aaPredicted RBP12.28□□□□□ -0.44
LSM2-212ENST00000477182 KHNYNO15037 678 aaKnown RBP12.28□□□□□ -0.44
LSM2-212ENST00000477182 TRAPPC3O43617 180 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 NOL4O94818 638 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 STAU1O95793 577 aaKnown RBP12.28□□□□□ -0.44
LSM2-212ENST00000477182 PNPLA4P41247 253 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 BRCC3P46736 316 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 SOX9P48436 509 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 PXNP49023 591 aaPredicted RBP12.28□□□□□ -0.44
LSM2-212ENST00000477182 LILRA4P59901 499 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 FCHO2Q0JRZ9 810 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 PON2Q15165 354 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 WDR72Q3MJ13 1102 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 SPECC1LQ69YQ0 1117 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 KIAA1211LQ6NV74 962 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 CD300LGQ6UXG3 332 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 SCARA5Q6ZMJ2 495 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 RRAGAQ7L523 313 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 TMC6Q7Z403 805 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 DRC7Q8IY82 874 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 PPM1KQ8N3J5 372 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 TAF4BQ92750 862 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 ZNF512Q96ME7 567 aaPredicted RBP12.28□□□□□ -0.44
LSM2-212ENST00000477182 ZSWIM3Q96MP5 696 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 DUSP15Q9H1R2 295 aaPredicted RBP12.28□□□□□ -0.44
LSM2-212ENST00000477182 GANQ9H2C0 597 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 VRTNQ9H8Y1 702 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 APEX2Q9UBZ4 518 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 AJAP1Q9UKB5 411 aaPredicted RBP12.28□□□□□ -0.44
LSM2-212ENST00000477182 FHOD1Q9Y613 1164 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 ITIH6Q6UXX5 1313 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 NUP205Q92621 2012 aa12.28□□□□□ -0.44
LSM2-212ENST00000477182 MAST4O15021 2626 aa12.27□□□□□ -0.44
LSM2-212ENST00000477182 FREM2Q5SZK8 3169 aa12.27□□□□□ -0.44
LSM2-212ENST00000477182 KPNA7A9QM74 516 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 H0Y626 953 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 TMEM189-UBE2V1I3L0A0 370 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 I3L4J1 428 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 ABLIM3O94929 683 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 TRIM16O95361 564 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 ATF2P15336 505 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 TRIM21P19474 475 aaKnown RBP12.27□□□□□ -0.45
LSM2-212ENST00000477182 CDC25BP30305 580 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 CCR2P41597 374 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 POLR2FP61218 127 aaKnown RBP12.27□□□□□ -0.45
LSM2-212ENST00000477182 TNNC1P63316 161 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 SLC8B1Q6J4K2 584 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 TXNDC11Q6PKC3 985 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 C19orf48Q6RUI8 117 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 TCEAL8Q8IYN2 117 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 SPC24Q8NBT2 197 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 KAT5Q92993 513 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 KREMEN1Q96MU8 473 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 ARID3AQ99856 593 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 SLITRK6Q9H5Y7 841 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 CYP4F11Q9HBI6 524 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 UBE2TQ9NPD8 197 aaPredicted RBP12.27□□□□□ -0.45
LSM2-212ENST00000477182 NLRC4Q9NPP4 1024 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 DNAJC12Q9UKB3 198 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 KLK13Q9UKR3 277 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 SNX9Q9Y5X1 595 aa12.27□□□□□ -0.45
LSM2-212ENST00000477182 PCNX2A6NKB5 2137 aa12.26□□□□□ -0.45
LSM2-212ENST00000477182 FAM221BA6H8Z2 402 aa12.26□□□□□ -0.45
LSM2-212ENST00000477182 CYB561D2O14569 222 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms