RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 KAT7O95251 611 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 VNN1O95497 513 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 CAVIN2O95810 425 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 C4BPAP04003 597 aaKnown RBP13.93□□□□□ -0.18
MRPL55-228ENST00000476267 YWHAQP27348 245 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 TUBP50607 506 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 CREB5Q02930 508 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 ST3GAL2Q16842 350 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 HSF5Q4G112 596 aaPredicted RBP13.93□□□□□ -0.18
MRPL55-228ENST00000476267 RNF43Q68DV7 783 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 ANO7Q6IWH7 933 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 C11orf74Q86VG3 221 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 DDX42Q86XP3 938 aaKnown RBP eCLIP13.93□□□□□ -0.18
MRPL55-228ENST00000476267 ETFBKMTQ8IXQ9 262 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 FUKQ8N0W3 1084 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 CCDC33Q8N5R6 958 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 ALLCQ8N6M5 410 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 PDZD8Q8NEN9 1154 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 ZMIZ2Q8NF64 920 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 SCAMP5Q8TAC9 235 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 PNKPQ96T60 521 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 EDEM2Q9BV94 578 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 PCDHA7Q9UN72 937 aa13.93□□□□□ -0.18
MRPL55-228ENST00000476267 THADAQ6YHU6 1953 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 EPG5Q9HCE0 2579 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 SGK1O00141 431 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 GREM1O60565 184 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 RTN3O95197 1032 aaPredicted RBP13.92□□□□□ -0.18
MRPL55-228ENST00000476267 MBL2P11226 248 aaPredicted RBP13.92□□□□□ -0.18
MRPL55-228ENST00000476267 P2RY2P41231 377 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 PGFP49763 221 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 SLC5A3P53794 718 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 STK4Q13043 487 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 TRPC3Q13507 836 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 USP39Q53GS9 565 aaKnown RBP13.92□□□□□ -0.18
MRPL55-228ENST00000476267 EMC10Q5UCC4 262 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 SLC9A9Q8IVB4 645 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 GRAMD1CQ8IYS0 662 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 TXNDC5Q8NBS9 432 aaKnown RBP13.92□□□□□ -0.18
MRPL55-228ENST00000476267 KIAA0895Q8NCT3 520 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 SNX21Q969T3 373 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 WBP2Q969T9 261 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 ELMO3Q96BJ8 720 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 OTUB2Q96DC9 234 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 CCSER2Q9H7U1 834 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 CSNK1G1Q9HCP0 422 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 TBC1D14Q9P2M4 693 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 ANGPTL2Q9UKU9 493 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 HCN2Q9UL51 889 aa13.92□□□□□ -0.18
MRPL55-228ENST00000476267 CFAP47Q6ZTR5 3102 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 MYOFQ9NZM1 2061 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 PATE3B3GLJ2 98 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 CDX4O14627 284 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-228ENST00000476267 HOXC11O43248 304 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-228ENST00000476267 ACTN4O43707 911 aaKnown RBP13.91□□□□□ -0.18
MRPL55-228ENST00000476267 EXOC3O60645 756 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 BEST1O76090 585 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 KLF8O95600 359 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-228ENST00000476267 ADH1CP00326 375 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 F13A1P00488 732 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 ABL1P00519 1130 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 ZSCAN22P10073 491 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-228ENST00000476267 ADH5P11766 374 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 GBP1P32455 592 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 GRIA2P42262 883 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 AP3M2P53677 418 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 DLG4P78352 724 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 IFRD2Q12894 506 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-228ENST00000476267 NCOA4Q13772 614 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 ZNF699Q32M78 642 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 LY6G5CQ5SRR4 150 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 C1orf220Q5T0J3 134 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 FBXO32Q969P5 355 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 SMARCD1Q96GM5 515 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 SMOQ99835 787 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 KCTD10Q9H3F6 313 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 DMAP1Q9NPF5 467 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-228ENST00000476267 ARHGEF4Q9NR80 690 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 COMMD8Q9NX08 183 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 HMGXB4Q9UGU5 601 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 CHORDC1Q9UHD1 332 aaPredicted RBP13.91□□□□□ -0.18
MRPL55-228ENST00000476267 WASF3Q9UPY6 502 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 SPTBN2O15020 2390 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 USP24Q9UPU5 2620 aa13.91□□□□□ -0.18
MRPL55-228ENST00000476267 C4orf47A7E2U8 309 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 APODP05090 189 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 TIE1P35590 1138 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 TNFRSF4P43489 277 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 AFMP43652 599 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 GAD2Q05329 585 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 KDSRQ06136 332 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 PKP1Q13835 747 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 MAP7D1Q3KQU3 841 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 ZACNQ401N2 412 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 ZNF667Q5HYK9 610 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 HECTD3Q5T447 861 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 PEAR1Q5VY43 1037 aaPredicted RBP13.9□□□□□ -0.18
MRPL55-228ENST00000476267 PSAPL1Q6NUJ1 521 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 SCARA5Q6ZMJ2 495 aa13.9□□□□□ -0.18
MRPL55-228ENST00000476267 BBS7Q8IWZ6 715 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms