RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 CIAO1O76071 339 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SUN1O94901 812 aa4□□□□□ -1.77
LSM2-211ENST00000475835 ENDOD1O94919 500 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TJP3O95049 919 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SYF2O95926 243 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 DNTTP04053 509 aa4□□□□□ -1.77
LSM2-211ENST00000475835 GLAP06280 429 aa4□□□□□ -1.77
LSM2-211ENST00000475835 PFKMP08237 780 aa4□□□□□ -1.77
LSM2-211ENST00000475835 GPR89BP0CG08 455 aa4□□□□□ -1.77
LSM2-211ENST00000475835 CLUP10909 449 aa4□□□□□ -1.77
LSM2-211ENST00000475835 VAV1P15498 845 aa4□□□□□ -1.77
LSM2-211ENST00000475835 RAB4AP20338 218 aa4□□□□□ -1.77
LSM2-211ENST00000475835 KCNA3P22001 575 aa4□□□□□ -1.77
LSM2-211ENST00000475835 HOXA11P31270 313 aaPredicted RBP4□□□□□ -1.77
LSM2-211ENST00000475835 SHMT1P34896 483 aa4□□□□□ -1.77
LSM2-211ENST00000475835 HTR7P34969 479 aa4□□□□□ -1.77
LSM2-211ENST00000475835 BMI1P35226 326 aa4□□□□□ -1.77
LSM2-211ENST00000475835 GP5P40197 560 aa4□□□□□ -1.77
LSM2-211ENST00000475835 RFC5P40937 340 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TXKP42681 527 aa4□□□□□ -1.77
LSM2-211ENST00000475835 CRKP46108 304 aa4□□□□□ -1.77
LSM2-211ENST00000475835 EIF2B2P49770 351 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 ARFIP2P53365 341 aa4□□□□□ -1.77
LSM2-211ENST00000475835 AP2S1P53680 142 aaPredicted RBP4□□□□□ -1.77
LSM2-211ENST00000475835 EMP3P54852 163 aa4□□□□□ -1.77
LSM2-211ENST00000475835 AIF1P55008 147 aa4□□□□□ -1.77
LSM2-211ENST00000475835 PEX3P56589 373 aa4□□□□□ -1.77
LSM2-211ENST00000475835 NLRP11P59045 1033 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 RPL26P61254 145 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 STX1BP61266 288 aa4□□□□□ -1.77
LSM2-211ENST00000475835 UBE2HP62256 183 aa4□□□□□ -1.77
LSM2-211ENST00000475835 RHAGQ02094 409 aa4□□□□□ -1.77
LSM2-211ENST00000475835 KCNC4Q03721 635 aa4□□□□□ -1.77
LSM2-211ENST00000475835 PPARAQ07869 468 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SSRP1Q08945 709 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 AIMP1Q12904 312 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 LRMPQ12912 555 aa4□□□□□ -1.77
LSM2-211ENST00000475835 MAP2K5Q13163 448 aa4□□□□□ -1.77
LSM2-211ENST00000475835 PLD1Q13393 1074 aa4□□□□□ -1.77
LSM2-211ENST00000475835 ELOAQ14241 798 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 ARHGAP19Q14CB8 494 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TLR1Q15399 786 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SF3B4Q15427 424 aaKnown RBP eCLIP4□□□□□ -1.77
LSM2-211ENST00000475835 TRADDQ15628 312 aa4□□□□□ -1.77
LSM2-211ENST00000475835 GRIK4Q16099 956 aa4□□□□□ -1.77
LSM2-211ENST00000475835 PPP2R5EQ16537 467 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TMEM266Q2M3C6 531 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TWISTNBQ3B726 338 aaPredicted RBP4□□□□□ -1.77
LSM2-211ENST00000475835 MMEL1Q495T6 779 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SAPCD1Q5SSQ6 148 aa4□□□□□ -1.77
LSM2-211ENST00000475835 THEM4Q5T1C6 240 aa4□□□□□ -1.77
LSM2-211ENST00000475835 FAM102BQ5T8I3 360 aa4□□□□□ -1.77
LSM2-211ENST00000475835 RNF220Q5VTB9 566 aa4□□□□□ -1.77
LSM2-211ENST00000475835 CACHD1Q5VU97 1274 aa4□□□□□ -1.77
LSM2-211ENST00000475835 FOXB2Q5VYV0 432 aa4□□□□□ -1.77
LSM2-211ENST00000475835 KRT40Q6A162 431 aa4□□□□□ -1.77
LSM2-211ENST00000475835 PTRHD1Q6GMV3 140 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 CENPPQ6IPU0 288 aa4□□□□□ -1.77
LSM2-211ENST00000475835 LRRC8BQ6P9F7 803 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TRIM72Q6ZMU5 477 aa4□□□□□ -1.77
LSM2-211ENST00000475835 PRR23BQ6ZRT6 265 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TRIM67Q6ZTA4 783 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TPGS1Q6ZTW0 290 aa4□□□□□ -1.77
LSM2-211ENST00000475835 MARK2Q7KZI7 788 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 UBE3BQ7Z3V4 1068 aa4□□□□□ -1.77
LSM2-211ENST00000475835 CCDC25Q86WR0 208 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SFR1Q86XK3 245 aa4□□□□□ -1.77
LSM2-211ENST00000475835 CCDC36Q8IYA8 594 aa4□□□□□ -1.77
LSM2-211ENST00000475835 CACNA2D3Q8IZS8 1091 aa4□□□□□ -1.77
LSM2-211ENST00000475835 ARFGAP1Q8N6T3 406 aa4□□□□□ -1.77
LSM2-211ENST00000475835 RAB3IL1Q8TBN0 382 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SPPL3Q8TCT6 385 aa4□□□□□ -1.77
LSM2-211ENST00000475835 COG1Q8WTW3 980 aa4□□□□□ -1.77
LSM2-211ENST00000475835 GTF3C2Q8WUA4 911 aaPredicted RBP4□□□□□ -1.77
LSM2-211ENST00000475835 SCFD1Q8WVM8 642 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SLC44A1Q8WWI5 657 aa4□□□□□ -1.77
LSM2-211ENST00000475835 RAPGEF4Q8WZA2 1011 aa4□□□□□ -1.77
LSM2-211ENST00000475835 INPP5DQ92835 1189 aa4□□□□□ -1.77
LSM2-211ENST00000475835 HPS1Q92902 700 aa4□□□□□ -1.77
LSM2-211ENST00000475835 FOXJ1Q92949 421 aa4□□□□□ -1.77
LSM2-211ENST00000475835 GJA10Q969M2 543 aa4□□□□□ -1.77
LSM2-211ENST00000475835 LRRC39Q96DD0 335 aa4□□□□□ -1.77
LSM2-211ENST00000475835 EDC3Q96F86 508 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 ZDHHC12Q96GR4 267 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SUCLG2Q96I99 432 aa4□□□□□ -1.77
LSM2-211ENST00000475835 ZDHHC15Q96MV8 337 aa4□□□□□ -1.77
LSM2-211ENST00000475835 XPO6Q96QU8 1125 aaKnown RBP4□□□□□ -1.77
LSM2-211ENST00000475835 CAMKK2Q96RR4 588 aa4□□□□□ -1.77
LSM2-211ENST00000475835 WDR24Q96S15 920 aa4□□□□□ -1.77
LSM2-211ENST00000475835 WRNIP1Q96S55 665 aa4□□□□□ -1.77
LSM2-211ENST00000475835 EYA1Q99502 592 aa4□□□□□ -1.77
LSM2-211ENST00000475835 NUP88Q99567 741 aaPredicted RBP4□□□□□ -1.77
LSM2-211ENST00000475835 NUP85Q9BW27 656 aa4□□□□□ -1.77
LSM2-211ENST00000475835 ACAT2Q9BWD1 397 aa4□□□□□ -1.77
LSM2-211ENST00000475835 STK33Q9BYT3 514 aa4□□□□□ -1.77
LSM2-211ENST00000475835 GPR61Q9BZJ8 451 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TRIM2Q9C040 744 aa4□□□□□ -1.77
LSM2-211ENST00000475835 DCLK3Q9C098 648 aa4□□□□□ -1.77
LSM2-211ENST00000475835 CLPBQ9H078 707 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SLC6A17Q9H1V8 727 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms