RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 BCO2Q9BYV7 579 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 KCNF1Q9H3M0 494 aa16.57■□□□□ 0.24
CPSF3-203ENST00000475482 EP300Q09472 2414 aaPredicted RBP16.57■□□□□ 0.24
CPSF3-203ENST00000475482 ESPNB1AK53 854 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 NCAM2O15394 837 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 CCP110O43303 1012 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 BDNFP23560 247 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 KLK7P49862 253 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 POLR2FP61218 127 aaKnown RBP16.56■□□□□ 0.24
CPSF3-203ENST00000475482 TNNC1P63316 161 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 CCZ1BP86790 482 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 CCZ1P86791 482 aaPredicted RBP16.56■□□□□ 0.24
CPSF3-203ENST00000475482 PPP3CAQ08209 521 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 LRMPQ12912 555 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 NCOA4Q13772 614 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 ZNF268Q14587 947 aaPredicted RBP16.56■□□□□ 0.24
CPSF3-203ENST00000475482 CBWD6Q4V339 395 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 CBWD3Q5JTY5 395 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 CBWD5Q5RIA9 395 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 KLHDC7AQ5VTJ3 777 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 TXNDC8Q6A555 127 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 C1orf228Q6PIY5 440 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 TRIM65Q6PJ69 517 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 SV2AQ7L0J3 742 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 GPIHBP1Q8IV16 184 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 MAB21L3Q8N8X9 362 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 FBXL13Q8NEE6 735 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 BPIFB1Q8TDL5 484 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 SYN2Q92777 582 aaPredicted RBP16.56■□□□□ 0.24
CPSF3-203ENST00000475482 USP13Q92995 863 aaPredicted RBP16.56■□□□□ 0.24
CPSF3-203ENST00000475482 SPAG5Q96R06 1193 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 TTLL2Q9BWV7 592 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 INTS2Q9H0H0 1204 aaKnown RBP16.56■□□□□ 0.24
CPSF3-203ENST00000475482 SNX25Q9H3E2 840 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 C8orf33Q9H7E9 229 aaPredicted RBP16.56■□□□□ 0.24
CPSF3-203ENST00000475482 COQ4Q9Y3A0 265 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 PIAS3Q9Y6X2 628 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 OTOGLQ3ZCN5 2332 aa16.56■□□□□ 0.24
CPSF3-203ENST00000475482 PRR23AA6NEV1 266 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 DPYSL4O14531 572 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 GFRA3O60609 400 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 PHACTR2O75167 634 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 CCDC172P0C7W6 258 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 SP9P0CG40 484 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 UCHL3P15374 230 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 PTPN1P18031 435 aaKnown RBP16.55■□□□□ 0.24
CPSF3-203ENST00000475482 SLC9A1P19634 815 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 CDK17Q00537 523 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 BIRC3Q13489 604 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 ZNF528Q3MIS6 628 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 SCN4BQ8IWT1 228 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 YAF2Q8IY57 180 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 OR6B3Q8NGW1 331 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 FAM3CQ92520 227 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 MRPS31Q92665 395 aaKnown RBP16.55■□□□□ 0.24
CPSF3-203ENST00000475482 C8orf48Q96LL4 319 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 FAM83CQ9BQN1 747 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 SMG9Q9H0W8 520 aaKnown RBP16.55■□□□□ 0.24
CPSF3-203ENST00000475482 DPEP3Q9H4B8 488 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 KIF9Q9HAQ2 790 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 TMEM30AQ9NV96 361 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 NXF1Q9UBU9 619 aaKnown RBP16.55■□□□□ 0.24
CPSF3-203ENST00000475482 FBXO4Q9UKT5 387 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 MAGED2Q9UNF1 606 aaPredicted RBP16.55■□□□□ 0.24
CPSF3-203ENST00000475482 CCL26Q9Y258 94 aa16.55■□□□□ 0.24
CPSF3-203ENST00000475482 ASS1P00966 412 aaKnown RBP16.54■□□□□ 0.24
CPSF3-203ENST00000475482 FECHP22830 423 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 HNRNPH3P31942 346 aaKnown RBP16.54■□□□□ 0.24
CPSF3-203ENST00000475482 CDH8P55286 799 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 NOP14P78316 857 aaKnown RBP16.54■□□□□ 0.24
CPSF3-203ENST00000475482 SGSM1Q2NKQ1 1148 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 ZNF699Q32M78 642 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 ZNF667Q5HYK9 610 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 MDH1BQ5I0G3 518 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 WDR44Q5JSH3 913 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 SFMBT2Q5VUG0 894 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 RRAGAQ7L523 313 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 ASCL5Q7RTU5 278 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 B3GALNT2Q8NCR0 500 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 RIN3Q8TB24 985 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 CSGALNACT1Q8TDX6 532 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 TAF4BQ92750 862 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 NELL1Q92832 810 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 ZFYVE19Q96K21 471 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 IMPG2Q9BZV3 1241 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 SDCBP2Q9H190 292 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 GANQ9H2C0 597 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 CHRDQ9H2X0 955 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 SMYD3Q9H7B4 428 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 TDP1Q9NUW8 608 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 RAB20Q9NX57 234 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 GTSE1Q9NYZ3 720 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 APEX2Q9UBZ4 518 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 HELZP42694 1942 aaKnown RBP16.54■□□□□ 0.24
CPSF3-203ENST00000475482 CFAP54Q96N23 3096 aa16.54■□□□□ 0.24
CPSF3-203ENST00000475482 A8MXQ7 604 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 TRIM66O15016 1216 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 CHRNB1P11230 501 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 TCF3P15923 654 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 CTHP32929 405 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms