RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 GHRP10912 638 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 PTPN1P18031 435 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 CST5P28325 142 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 TKTP29401 623 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 CD52P31358 61 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 RPL34P49207 117 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 MMRN1Q13201 1228 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 C6orf118Q5T5N4 469 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 LRRC31Q6UY01 552 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 SLC26A9Q7LBE3 791 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 SENP8Q96LD8 212 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 HNRNPABQ99729 332 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 FOXP3Q9BZS1 431 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 ADAM7Q9H2U9 754 aa16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 TPX2Q9ULW0 747 aaKnown RBP16.07■□□□□ 0.16
RPUSD3-215ENST00000475470 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 XPO1O14980 1071 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 RGS16O15492 202 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 TTC4O95801 387 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 IGFBP6P24592 240 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 SCNN1AP37088 669 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 SCNN1GP51170 649 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 CLCNKBP51801 687 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 TFDP2Q14188 446 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 DPYSL3Q14195 570 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 PDK2Q15119 407 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 AGMOQ6ZNB7 445 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 CEP128Q6ZU80 1094 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 ZCCHC9Q8N567 271 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 RNF169Q8NCN4 708 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 RSAD2Q8WXG1 361 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 PGM2Q96G03 612 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 TMEM109Q9BVC6 243 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 OSBPL7Q9BZF2 842 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 GABRDO14764 452 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 RASGRF2O14827 1237 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 EIF3HO15372 352 aaKnown RBP eCLIP16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 IBSPP21815 317 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 EIF3EP60228 445 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 DSTYKQ6XUX3 929 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 MRPL10Q7Z7H8 261 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 FUKQ8N0W3 1084 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 TEKT4Q8WW24 435 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 TBCBQ99426 244 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 MED10Q9BTT4 135 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 DUSP16Q9BY84 665 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 C10orf88Q9H8K7 445 aa16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 DDX43Q9NXZ2 648 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-215ENST00000475470 DCDC2CA8MYV0 355 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 CLDN5O00501 218 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 NDC80O14777 642 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 KIF3CO14782 793 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 MCF2LO15068 1137 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 PECAM1P16284 738 aaPredicted RBP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 PTPN9P43378 593 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 RAB27AP51159 221 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 HNRNPH2P55795 449 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 PPP2R2AP63151 447 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 GUCY1A3Q02108 690 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 ITGA7Q13683 1181 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 KYNUQ16719 465 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 RNF180Q86T96 592 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 PIGZQ86VD9 579 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 EPS8L3Q8TE67 593 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 TLCD1Q96CP7 247 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 GPATCH2LQ9NWQ4 482 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 CAPN15O75808 1086 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 MDH1P40925 334 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 SLCO1A2P46721 670 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 HDAC4P56524 1084 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 MORF4L2Q15014 288 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 ZC3H12AQ5D1E8 599 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 MDH1BQ5I0G3 518 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 EFHC1Q5JVL4 640 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 ARCQ7LC44 396 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 TMEM86AQ8N2M4 240 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 SPATA18Q8TC71 538 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 P3H4Q92791 437 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 RNF157Q96PX1 679 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 RBM15Q96T37 977 aaKnown RBP eCLIP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 SNRNP25Q9BV90 132 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 ROPN1BQ9BZX4 212 aaPredicted RBP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 ROPN1Q9HAT0 212 aaPredicted RBP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 TRMT13Q9NUP7 481 aaKnown RBP16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 DNAH12Q6ZR08 3092 aa16.05■□□□□ 0.16
RPUSD3-215ENST00000475470 CASTOR2A6NHX0 329 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 MGEA5O60502 916 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 IVLP07476 585 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 NPR3P17342 541 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 TFE3P19532 575 aaPredicted RBP16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 HOXD10P28358 340 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 RPL9P32969 192 aaKnown RBP16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 LHX1P48742 406 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 GDF10P55107 478 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 PTK7Q13308 1070 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 CCDC142Q17RM4 750 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 RELL1Q8IUW5 271 aa16.04■□□□□ 0.16
RPUSD3-215ENST00000475470 CAPNS2Q96L46 248 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms