RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 WASF3Q9UPY6 502 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 SH3BP1Q9Y3L3 701 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 STARD13Q9Y3M8 1113 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 NEUROG3Q9Y4Z2 214 aa13.14□□□□□ -0.31
TTC38-206ENST00000475467 PLXND1Q9Y4D7 1925 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 MYO18AQ92614 2054 aaKnown RBP13.13□□□□□ -0.31
TTC38-206ENST00000475467 TBC1D3BA6NDS4 549 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 A8MXQ7 604 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 KLF8O95600 359 aaPredicted RBP13.13□□□□□ -0.31
TTC38-206ENST00000475467 ABL1P00519 1130 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 SYPP08247 313 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 P4HA1P13674 534 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 ZNF132P52740 706 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 SEC13P55735 322 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 USP46P62068 366 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 ZXDBP98169 803 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 MAP7D1Q3KQU3 841 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 MDH1BQ5I0G3 518 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 CBWD2Q8IUF1 395 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 C12orf56Q8IXR9 622 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 CCDC33Q8N5R6 958 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 ALLCQ8N6M5 410 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 IQUBQ8NA54 791 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 B3GALNT2Q8NCR0 500 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 GOLGA5Q8TBA6 731 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 CLIC6Q96NY7 704 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.13□□□□□ -0.316e-9■■■■■ 52.2
TTC38-206ENST00000475467 POLR3BQ9NW08 1133 aaPredicted RBP13.13□□□□□ -0.31
TTC38-206ENST00000475467 CFAP97Q9P2B7 532 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 PILRBQ9UKJ0 227 aa13.13□□□□□ -0.31
TTC38-206ENST00000475467 ASCC3Q8N3C0 2202 aaKnown RBP13.13□□□□□ -0.31
TTC38-206ENST00000475467 GON4LQ3T8J9 2241 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 FAM92AA1XBS5 289 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 SGK1O00141 431 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 PPP6R2O75170 966 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
TTC38-206ENST00000475467 SERPINF2P08697 491 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 DLATP10515 647 aaKnown RBP13.12□□□□□ -0.31
TTC38-206ENST00000475467 SYT1P21579 422 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 BCKDHBP21953 392 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 TIE1P35590 1138 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 NASPP49321 788 aaPredicted RBP13.12□□□□□ -0.31
TTC38-206ENST00000475467 GFPT1Q06210 699 aaPredicted RBP13.12□□□□□ -0.31
TTC38-206ENST00000475467 FOXC1Q12948 553 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 SLC14A1Q13336 389 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 FAM26FQ5R3K3 315 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 EPM2AIP1Q7L775 607 aaPredicted RBP13.12□□□□□ -0.31
TTC38-206ENST00000475467 ETFBKMTQ8IXQ9 262 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 PGBD3Q8N328 593 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 TMEM174Q8WUU8 243 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 FBXO32Q969P5 355 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 SMARCD1Q96GM5 515 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 XPO6Q96QU8 1125 aaKnown RBP13.12□□□□□ -0.31
TTC38-206ENST00000475467 MRPL45Q9BRJ2 306 aaKnown RBP13.12□□□□□ -0.31
TTC38-206ENST00000475467 TRIM9Q9C026 710 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 FAM124BQ9H5Z6 455 aaPredicted RBP13.12□□□□□ -0.31
TTC38-206ENST00000475467 DMAP1Q9NPF5 467 aaPredicted RBP13.12□□□□□ -0.31
TTC38-206ENST00000475467 WDR35Q9P2L0 1181 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 SUSD2Q9UGT4 822 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 ZMIZ1Q9ULJ6 1067 aa13.12□□□□□ -0.31
TTC38-206ENST00000475467 A0A1W2PQD8 194 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 FAM221BA6H8Z2 402 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 GFRA2O00451 464 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 NPC1O15118 1278 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 CST3P01034 146 aaPredicted RBP13.11□□□□□ -0.31
TTC38-206ENST00000475467 ZDHHC11BP0C7U3 371 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 NTSR1P30989 418 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 SLC6A11P48066 632 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 CYP24A1Q07973 514 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 SEMA3BQ13214 749 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 ZNF423Q2M1K9 1284 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 UAP1L1Q3KQV9 507 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 LY6G5CQ5SRR4 150 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 ZNF513Q8N8E2 541 aaPredicted RBP13.11□□□□□ -0.31
TTC38-206ENST00000475467 TERB1Q8NA31 727 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 HMGB4Q8WW32 186 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 C7orf25Q9BPX7 421 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 SCNM1Q9BWG6 230 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 NACA2Q9H009 215 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 SPHK2Q9NRA0 654 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 AGPAT3Q9NRZ7 376 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 SMPD4Q9NXE4 827 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 INVSQ9Y283 1065 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 MSRB2Q9Y3D2 182 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 NFE2L3Q9Y4A8 694 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 PTPRJQ12913 1337 aa13.11□□□□□ -0.31
TTC38-206ENST00000475467 PVALEFA0A1B0GWK0 134 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 TCRBV21S2A2A0A5A6 115 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 C1QTNF9BB2RNN3 333 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 PATE3B3GLJ2 98 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 GIPC1O14908 333 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 COCHO43405 550 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 HCRTO43612 131 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 OPHN1O60890 802 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 ADAM23O75077 832 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 PHACTR2O75167 634 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 TULP3O75386 442 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 RPN1P04843 607 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms