RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 STRA6Q9BX79 667 aa19.15■□□□□ 0.66
RNF220-212ENST00000475378 ITGA11Q9UKX5 1188 aa19.15■□□□□ 0.66
RNF220-212ENST00000475378 RAXQ9Y2V3 346 aa19.15■□□□□ 0.66
RNF220-212ENST00000475378 PCDHB9Q9Y5E1 797 aa19.15■□□□□ 0.66
RNF220-212ENST00000475378 CBFA2T3O75081 653 aa19.14■□□□□ 0.65
RNF220-212ENST00000475378 KRT18P05783 430 aaKnown RBP19.14■□□□□ 0.65
RNF220-212ENST00000475378 GRIK1P39086 918 aa19.14■□□□□ 0.65
RNF220-212ENST00000475378 NOP14P78316 857 aaKnown RBP19.14■□□□□ 0.65
RNF220-212ENST00000475378 TRMT11Q7Z4G4 463 aaKnown RBP19.14■□□□□ 0.65
RNF220-212ENST00000475378 SLCO6A1Q86UG4 719 aa19.14■□□□□ 0.65
RNF220-212ENST00000475378 MIB1Q86YT6 1006 aa19.14■□□□□ 0.65
RNF220-212ENST00000475378 TRIML1Q8N9V2 468 aa19.14■□□□□ 0.65
RNF220-212ENST00000475378 CACTINQ8WUQ7 758 aaKnown RBP19.14■□□□□ 0.65
RNF220-212ENST00000475378 RAD54LQ92698 747 aa19.14■□□□□ 0.65
RNF220-212ENST00000475378 CALML4Q96GE6 196 aa19.14■□□□□ 0.65
RNF220-212ENST00000475378 ZNF419Q96HQ0 510 aaPredicted RBP19.14■□□□□ 0.65
RNF220-212ENST00000475378 AK8Q96MA6 479 aa19.14■□□□□ 0.65
RNF220-212ENST00000475378 FAM213AQ9BRX8 229 aa19.14■□□□□ 0.65
RNF220-212ENST00000475378 CDH9Q9ULB4 789 aa19.14■□□□□ 0.65
RNF220-212ENST00000475378 MYH10P35580 1976 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 CABIN1Q9Y6J0 2220 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 TBC1D3BA6NDS4 549 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 HOXB2P14652 356 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 RBP5P82980 135 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 GAD2Q05329 585 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 KCNA1Q09470 495 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 PLEKHG6Q3KR16 790 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 TOGARAM2Q6ZUX3 1019 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 DPH6Q7L8W6 267 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 DDX42Q86XP3 938 aaKnown RBP eCLIP19.13■□□□□ 0.65
RNF220-212ENST00000475378 HVCN1Q96D96 273 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 ZFRQ96KR1 1074 aaKnown RBP19.13■□□□□ 0.65
RNF220-212ENST00000475378 TBC1D14Q9P2M4 693 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 DKK4Q9UBT3 224 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 KNL1Q8NG31 2342 aa19.13■□□□□ 0.65
RNF220-212ENST00000475378 E2F8A0AVK6 867 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 TRIM66O15016 1216 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 HOXC11O43248 304 aaPredicted RBP19.12■□□□□ 0.65
RNF220-212ENST00000475378 ZNF217O75362 1048 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 TULP3O75386 442 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 KRT19P08727 400 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 NDUFV2P19404 249 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 ANXA13P27216 316 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 TAF10Q12962 218 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 NAT16Q8N8M0 369 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 TERB1Q8NA31 727 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 OTUB2Q96DC9 234 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 SAAL1Q96ER3 474 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 PCED1BQ96HM7 432 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 LRIG1Q96JA1 1093 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 ZSCAN31Q96LW9 406 aaPredicted RBP19.12■□□□□ 0.65
RNF220-212ENST00000475378 MTMR12Q9C0I1 747 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 FAM124BQ9H5Z6 455 aaPredicted RBP19.12■□□□□ 0.65
RNF220-212ENST00000475378 CD93Q9NPY3 652 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 CACNA2D2Q9NY47 1150 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 RBAKQ9NYW8 714 aaPredicted RBP19.12■□□□□ 0.65
RNF220-212ENST00000475378 EHD2Q9NZN4 543 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 KIAA1522Q9P206 1035 aaPredicted RBP19.12■□□□□ 0.65
RNF220-212ENST00000475378 CYP8B1Q9UNU6 501 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 APOBEC2Q9Y235 224 aaKnown RBP19.12■□□□□ 0.65
RNF220-212ENST00000475378 STARD13Q9Y3M8 1113 aa19.12■□□□□ 0.65
RNF220-212ENST00000475378 F8VP50 259 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 MBL2P11226 248 aaPredicted RBP19.11■□□□□ 0.65
RNF220-212ENST00000475378 NTSR1P30989 418 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 UBA7P41226 1012 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 WASP42768 502 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 CYP27A1Q02318 531 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 GRIK2Q13002 908 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 MAPRE1Q15691 268 aaKnown RBP19.11■□□□□ 0.65
RNF220-212ENST00000475378 C10orf76Q5T2E6 689 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 SFR1Q86XK3 245 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 ADAM32Q8TC27 787 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 C8orf48Q96LL4 319 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 DUSP9Q99956 384 aaKnown RBP19.11■□□□□ 0.65
RNF220-212ENST00000475378 TMEM30AQ9NV96 361 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 SUSD2Q9UGT4 822 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 PCOLCE2Q9UKZ9 415 aa19.11■□□□□ 0.65
RNF220-212ENST00000475378 KALRNO60229 2985 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 TRIM24O15164 1050 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 DKK1O94907 266 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 ABL1P00519 1130 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 WARSP23381 471 aaKnown RBP19.1■□□□□ 0.65
RNF220-212ENST00000475378 CACNA2D1P54289 1103 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 PREPLQ4J6C6 727 aaPredicted RBP19.1■□□□□ 0.65
RNF220-212ENST00000475378 EGFLAMQ63HQ2 1017 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 TMPRSS7Q7RTY8 843 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 GLIS3Q8NEA6 775 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 MYCBPAPQ8TBZ2 947 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 IPO4Q8TEX9 1081 aaKnown RBP19.1■□□□□ 0.65
RNF220-212ENST00000475378 LARP4BQ92615 738 aaKnown RBP19.1■□□□□ 0.65
RNF220-212ENST00000475378 ACOX2Q99424 681 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 ZDHHC5Q9C0B5 715 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 PDE11AQ9HCR9 933 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 TOR4AQ9NXH8 423 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 DEC1Q9P2X7 70 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 NME7Q9Y5B8 376 aa19.1■□□□□ 0.65
RNF220-212ENST00000475378 LDHAP00338 332 aaKnown RBP19.09■□□□□ 0.65
RNF220-212ENST00000475378 PDGFRBP09619 1106 aa19.09■□□□□ 0.65
RNF220-212ENST00000475378 GRIN1Q05586 938 aa19.09■□□□□ 0.65
RNF220-212ENST00000475378 BTBD8Q5XKL5 378 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms