RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 PATE3B3GLJ2 98 aa26.46■■□□□ 1.83
TMEM54-205ENST00000475208 SGK1O00141 431 aa26.46■■□□□ 1.83
TMEM54-205ENST00000475208 RTN3O95197 1032 aaPredicted RBP26.46■■□□□ 1.83
TMEM54-205ENST00000475208 CASP1P29466 404 aa26.46■■□□□ 1.83
TMEM54-205ENST00000475208 ATICP31939 592 aa26.46■■□□□ 1.83
TMEM54-205ENST00000475208 OLIG1Q8TAK6 271 aa26.46■■□□□ 1.83
TMEM54-205ENST00000475208 ZNF396Q96N95 335 aaPredicted RBP26.46■■□□□ 1.83
TMEM54-205ENST00000475208 SMYD3Q9H7B4 428 aa26.46■■□□□ 1.83
TMEM54-205ENST00000475208 TMEM9BQ9NQ34 198 aa26.46■■□□□ 1.83
TMEM54-205ENST00000475208 TBC1D14Q9P2M4 693 aa26.46■■□□□ 1.83
TMEM54-205ENST00000475208 CIZ1Q9ULV3 898 aaPredicted RBP26.46■■□□□ 1.83
TMEM54-205ENST00000475208 ATP8B3O60423 1300 aa26.45■■□□□ 1.83
TMEM54-205ENST00000475208 CEP295Q9C0D2 2601 aa26.45■■□□□ 1.83
TMEM54-205ENST00000475208 E2F8A0AVK6 867 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 GIPC1O14908 333 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 COCHO43405 550 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 CUTAO60888 179 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 PHACTR2O75167 634 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 YEATS4O95619 227 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 HSF5Q4G112 596 aaPredicted RBP26.45■■□□□ 1.82
TMEM54-205ENST00000475208 EMC10Q5UCC4 262 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 C12orf56Q8IXR9 622 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 WHAMMQ8TF30 809 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 RLN3Q8WXF3 142 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 OVCA2Q8WZ82 227 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 PIGKQ92643 395 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 ZFRQ96KR1 1074 aaKnown RBP26.45■■□□□ 1.82
TMEM54-205ENST00000475208 KCNK16Q96T55 309 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 BLZF1Q9H2G9 400 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 MAGEF1Q9HAY2 307 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 ZDHHC4Q9NPG8 344 aa26.45■■□□□ 1.82
TMEM54-205ENST00000475208 MYOFQ9NZM1 2061 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.44■■□□□ 1.82
TMEM54-205ENST00000475208 CLSTN1O94985 981 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 P2RY2P41231 377 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 GRIA2P42262 883 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 KIR2DL1P43626 348 aaPredicted RBP26.44■■□□□ 1.82
TMEM54-205ENST00000475208 CASP4P49662 377 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 CDH8P55286 799 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 BMT2Q1RMZ1 405 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 EOGTQ5NDL2 527 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 LY6G5CQ5SRR4 150 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 FAM35AQ86V20 835 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 SPACA7Q96KW9 195 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 MED10Q9BTT4 135 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 POLMQ9NP87 494 aaPredicted RBP26.44■■□□□ 1.82
TMEM54-205ENST00000475208 SLC39A2Q9NP94 309 aa26.44■■□□□ 1.82
TMEM54-205ENST00000475208 BCCIPQ9P287 314 aaKnown RBP eCLIP26.44■■□□□ 1.82
TMEM54-205ENST00000475208 CGNQ9P2M7 1197 aaKnown RBP26.44■■□□□ 1.82
TMEM54-205ENST00000475208 K7ELQ4 463 aaPredicted RBP26.43■■□□□ 1.82
TMEM54-205ENST00000475208 POLR2DO15514 142 aaKnown RBP26.43■■□□□ 1.82
TMEM54-205ENST00000475208 EXOC3O60645 756 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 SLC5A3P53794 718 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 ZNF252P-AS1Q0IIN9 211 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 BIRC3Q13489 604 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 ZNF699Q32M78 642 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 HECTD3Q5T447 861 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 SH3PXD2AQ5TCZ1 1133 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 LPCAT2Q7L5N7 544 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 SCAMP5Q8TAC9 235 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 PLEKHO2Q8TD55 490 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 OTUB2Q96DC9 234 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 VRTNQ9H8Y1 702 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 CHORDC1Q9UHD1 332 aaPredicted RBP26.43■■□□□ 1.82
TMEM54-205ENST00000475208 SH3BP1Q9Y3L3 701 aa26.43■■□□□ 1.82
TMEM54-205ENST00000475208 CFAP47Q6ZTR5 3102 aa26.42■■□□□ 1.82
TMEM54-205ENST00000475208 A0A0A0MRY4 1105 aa26.42■■□□□ 1.82
TMEM54-205ENST00000475208 CDX4O14627 284 aaPredicted RBP26.42■■□□□ 1.82
TMEM54-205ENST00000475208 TNFRSF4P43489 277 aa26.42■■□□□ 1.82
TMEM54-205ENST00000475208 IRX4P78413 519 aa26.42■■□□□ 1.82
TMEM54-205ENST00000475208 GAD2Q05329 585 aa26.42■■□□□ 1.82
TMEM54-205ENST00000475208 SCARA5Q6ZMJ2 495 aa26.42■■□□□ 1.82
TMEM54-205ENST00000475208 PHTF2Q8N3S3 785 aa26.42■■□□□ 1.82
TMEM54-205ENST00000475208 HMGB4Q8WW32 186 aa26.42■■□□□ 1.82
TMEM54-205ENST00000475208 CCSER2Q9H7U1 834 aa26.42■■□□□ 1.82
TMEM54-205ENST00000475208 DMAP1Q9NPF5 467 aaPredicted RBP26.42■■□□□ 1.82
TMEM54-205ENST00000475208 GMIPQ9P107 970 aa26.42■■□□□ 1.82
TMEM54-205ENST00000475208 FRYQ5TBA9 3013 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.41■■□□□ 1.82
TMEM54-205ENST00000475208 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 TNFRSF10BO14763 440 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 MAP3K13O43283 966 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 ADAM23O75077 832 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 KNOP1Q1ED39 458 aaKnown RBP26.41■■□□□ 1.82
TMEM54-205ENST00000475208 ZNF667Q5HYK9 610 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 PAQR9Q6ZVX9 377 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 ARMCX6Q7L4S7 300 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 ETFBKMTQ8IXQ9 262 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 TMEFF1Q8IYR6 380 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 FRMD1Q8N878 549 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 ELMO3Q96BJ8 720 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 SMARCD1Q96GM5 515 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 TNIP3Q96KP6 325 aa26.41■■□□□ 1.82
TMEM54-205ENST00000475208 EVLQ9UI08 416 aaPredicted RBP26.41■■□□□ 1.82
TMEM54-205ENST00000475208 TCRBV21S2A2A0A5A6 115 aa26.4■■□□□ 1.82
TMEM54-205ENST00000475208 HOXC11O43248 304 aaPredicted RBP26.4■■□□□ 1.82
TMEM54-205ENST00000475208 TUBP50607 506 aa26.4■■□□□ 1.82
TMEM54-205ENST00000475208 NCOA4Q13772 614 aa26.4■■□□□ 1.82
TMEM54-205ENST00000475208 TRIM61Q5EBN2 209 aa26.4■■□□□ 1.82
TMEM54-205ENST00000475208 SNX30Q5VWJ9 437 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms