RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 PKDCCQ504Y2 493 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 KLHDC7AQ5VTJ3 777 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 APTXQ7Z2E3 356 aaKnown RBP17.12■□□□□ 0.33
SRM-204ENST00000475189 PIGZQ86VD9 579 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 UBA3Q8TBC4 463 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 BPIFB1Q8TDL5 484 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 SHC3Q92529 594 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 RNF38Q9H0F5 515 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 BRD9Q9H8M2 597 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 KIF9Q9HAQ2 790 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 DNAJC12Q9UKB3 198 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.12■□□□□ 0.33
SRM-204ENST00000475189 SCML2Q9UQR0 700 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 USP3Q9Y6I4 520 aa17.12■□□□□ 0.33
SRM-204ENST00000475189 ZNF263O14978 683 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 XPO1O14980 1071 aaKnown RBP17.11■□□□□ 0.33
SRM-204ENST00000475189 CHADO15335 359 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 CKMP06732 381 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 ATP1A3P13637 1013 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 PDE6CP51160 858 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 SLC8A3P57103 927 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 PFKPQ01813 784 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 IQCB1Q15051 598 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 STILQ15468 1287 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 RAB41Q5JT25 222 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 SMYD5Q6GMV2 418 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 YAF2Q8IY57 180 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 SIX5Q8N196 739 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 ANKRD20A12PQ8NF67 263 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 RIN3Q8TB24 985 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 IRF7Q92985 503 aa17.11■□□□□ 0.33
SRM-204ENST00000475189 LSM14BQ9BX40 385 aaKnown RBP17.11■□□□□ 0.33
SRM-204ENST00000475189 COL4A3Q01955 1670 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 ARNTLO00327 626 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 CYP26A1O43174 497 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 OLFM2O95897 454 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 USP8P40818 1118 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 ZSCAN23Q3MJ62 389 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 ARHGAP29Q52LW3 1261 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 SLC44A4Q53GD3 710 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 HECTD3Q5T447 861 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 CCDC186Q7Z3E2 898 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 DNASE1L2Q92874 299 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 NAA15Q9BXJ9 866 aaKnown RBP17.1■□□□□ 0.33
SRM-204ENST00000475189 CCSER2Q9H7U1 834 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 ACP6Q9NPH0 428 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 PLCB1Q9NQ66 1216 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 TRPV5Q9NQA5 729 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 ARHGEF3Q9NR81 526 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 TLR8Q9NR97 1041 aaKnown RBP17.1■□□□□ 0.33
SRM-204ENST00000475189 ARHGAP26Q9UNA1 814 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 FHOD1Q9Y613 1164 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 F5P12259 2224 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 ZNF318Q5VUA4 2279 aa17.1■□□□□ 0.33
SRM-204ENST00000475189 LGALS16A8MUM7 142 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 M0QYV0 167 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 FOXN3O00409 490 aaPredicted RBP17.09■□□□□ 0.33
SRM-204ENST00000475189 SETSIPP0DME0 302 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 TCF3P15923 654 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 GNA15P30679 374 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 PLA2G4AP47712 749 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 KLK7P49862 253 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 TUBP50607 506 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 SLC7A9P82251 487 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 ZXDBP98169 803 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 USP4Q13107 963 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 MLF2Q15773 248 aaPredicted RBP17.09■□□□□ 0.33
SRM-204ENST00000475189 ZNF77Q15935 545 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 FKBP15Q5T1M5 1219 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 FBXL6Q8N531 539 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 SLC35F5Q8WV83 523 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 ZNF606Q8WXB4 792 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 SECISBP2LQ93073 1101 aaKnown RBP17.09■□□□□ 0.33
SRM-204ENST00000475189 ZFYVE19Q96K21 471 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 NMUR1Q9HB89 426 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 HEBP1Q9NRV9 189 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 THG1LQ9NWX6 298 aaKnown RBP17.09■□□□□ 0.33
SRM-204ENST00000475189 OSER1Q9NX31 292 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 SIK3Q9Y2K2 1263 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 CPQQ9Y646 472 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 KMT2EQ8IZD2 1858 aa17.09■□□□□ 0.33
SRM-204ENST00000475189 A0A1W2PQH9 124 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 COCHO43405 550 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 PNMA6AP0CW24 399 aaPredicted RBP17.08■□□□□ 0.32
SRM-204ENST00000475189 UCHL3P15374 230 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 CLCN1P35523 988 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 TKTL1P51854 596 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 STARD6P59095 220 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 DRAP1Q14919 205 aaPredicted RBP17.08■□□□□ 0.32
SRM-204ENST00000475189 NFKBIBQ15653 356 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 PMF1Q6P1K2 205 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 SCD5Q86SK9 330 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 SH3RF2Q8TEC5 729 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 KCTD13Q8WZ19 329 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 FAM83CQ9BQN1 747 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 GANQ9H2C0 597 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 MFSD1Q9H3U5 465 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 CBX8Q9HC52 389 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 GKN1Q9NS71 199 aa17.08■□□□□ 0.32
SRM-204ENST00000475189 MIA3Q5JRA6 1907 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms