RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ULBP1Q9BZM6 244 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 CSNK1G1Q9HCP0 422 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 ALG13Q9NP73 1137 aaKnown RBP10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 HSFX1Q9UBD0 423 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 CHORDC1Q9UHD1 332 aaPredicted RBP10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 HYOU1Q9Y4L1 999 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 PATJQ8NI35 1801 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 WDR27A2RRH5 827 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 CCDC66A2RUB6 948 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 GRXCR1A8MXD5 290 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 C5orf67F2Z3F1 127 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 ENC1O14682 589 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 DAB1O75553 588 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 GRAP2O75791 330 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 PROSCO94903 275 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 GLUD1P00367 558 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 LTFP02788 710 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 USP17L7P0C7H9 530 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 HAPLN1P10915 354 aaPredicted RBP10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 ATF2P15336 505 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 MAN1A1P33908 653 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 PAFAH1B1P43034 410 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 YWHAZP63104 245 aaKnown RBP10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 MRPS5P82675 430 aaKnown RBP10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 CKAP4Q07065 602 aaKnown RBP10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 PTP4A2Q12974 167 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 DUSP4Q13115 394 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 RAB33AQ14088 237 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 ACAP1Q15027 740 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 PTPROQ16827 1216 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 DDR2Q16832 855 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 SEL1L2Q5TEA6 688 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 BTBD8Q5XKL5 378 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 OLFML1Q6UWY5 402 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 DENND5BQ6ZUT9 1274 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 PAQR9Q6ZVX9 377 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 RSRC2Q7L4I2 434 aaKnown RBP10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 TADA2BQ86TJ2 420 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 RHOT1Q8IXI2 618 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 FNIP1Q8TF40 1166 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 AUTS2Q8WXX7 1259 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 FBXO32Q969P5 355 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 GCNAQ96QF7 691 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 WDR24Q96S15 920 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 GDF15Q99988 308 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 VN1R3Q9BXE9 311 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 NACA2Q9H009 215 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 NKX2-4Q9H2Z4 354 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 POPDC2Q9HBU9 364 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 COMMD8Q9NX08 183 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 RRN3Q9NYV6 651 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 UXTQ9UBK9 157 aaPredicted RBP10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 MAGED2Q9UNF1 606 aaPredicted RBP10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 COG5Q9UP83 839 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 SLC27A5Q9Y2P5 690 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 SAR1BQ9Y6B6 198 aa10.77□□□□□ -0.69
PRPF38A-202ENST00000474048 TMEM191CA6NGB0 347 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 KCNK3O14649 394 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 PAPSS1O43252 624 aaPredicted RBP10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 PRPSAP2O60256 369 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 TBC1D4O60343 1298 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 BEST1O76090 585 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 ABL1P00519 1130 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 KRT7P08729 469 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 CSH1P0DML2 217 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 CSH2P0DML3 217 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 RALAP11233 206 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 MYOGP15173 224 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 COMTP21964 271 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 YWHAQP27348 245 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 GBP1P32455 592 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 RFC1P35251 1148 aaPredicted RBP10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 PSEN1P49768 467 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 SULT1E1P49888 294 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 ZNF143P52747 638 aaPredicted RBP10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 DAOAP59103 153 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 CDO1Q16878 200 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 DCAF6Q58WW2 860 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 RAB41Q5JT25 222 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 MEI1Q5TIA1 1274 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 LLGL2Q6P1M3 1020 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 CCDC50Q8IVM0 306 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 EMC1Q8N766 993 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 STKLD1Q8NE28 680 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 MNS1Q8NEH6 495 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 PDZD8Q8NEN9 1154 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 RXFP2Q8WXD0 754 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 ARNTL2Q8WYA1 636 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 BTBD6Q96KE9 485 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 SPATA17Q96L03 361 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 CDK5RAP1Q96SZ6 601 aaKnown RBP10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 NAP1L3Q99457 506 aaPredicted RBP10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 CLSTN3Q9BQT9 956 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 CNPY3Q9BT09 278 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 LMAN2LQ9H0V9 348 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 FAM204AQ9H8W3 233 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 TLR8Q9NR97 1041 aaKnown RBP10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 ABCC13Q9NSE7 274 aa10.76□□□□□ -0.69
PRPF38A-202ENST00000474048 TMEM51Q9NW97 253 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms