RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CFAP57Q96MR6 1250 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 POLR3CQ9BUI4 534 aaPredicted RBP10.55□□□□□ -0.72
APTX-216ENST00000472896 RANBP17Q9H2T7 1088 aaKnown RBP10.55□□□□□ -0.72
APTX-216ENST00000472896 ZNF287Q9HBT7 754 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 TMEM165Q9HC07 324 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 MAD2L2Q9UI95 211 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 CHMP2BQ9UQN3 213 aa10.55□□□□□ -0.72
APTX-216ENST00000472896 SMCO2A6NFE2 343 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 PDXKO00764 312 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 NDC80O14777 642 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 TGDSO95455 350 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 ESRRAP11474 423 aaPredicted RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 RFX1P22670 979 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 EDNRBP24530 442 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 SERPINB3P29508 390 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 CHKAP35790 457 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 CETN2P41208 172 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 CD97P48960 835 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 IRX4P78413 519 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 KRT17Q04695 432 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 ZP2Q05996 745 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 MPP3Q13368 585 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 MED21Q13503 144 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 THOC5Q13769 683 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 MBTPS1Q14703 1052 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 TRIM71Q2Q1W2 868 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 BRDTQ58F21 947 aaPredicted RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 DNAAF5Q86Y56 855 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 DTX3LQ8TDB6 740 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 TBCKQ8TEA7 893 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 ZNF75CPQ92670 426 aaPredicted RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 ARHGEF26Q96DR7 871 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 MRPL38Q96DV4 380 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 MPHOSPH6Q99547 160 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 DDX50Q9BQ39 737 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 TRIM55Q9BYV6 548 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 KCNH6Q9H252 994 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 TRABDQ9H4I3 376 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 C17orf75Q9HAS0 396 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 METTL5Q9NRN9 209 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 ARL8BQ9NVJ2 186 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 RHBDL2Q9NX52 303 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 PLK2Q9NYY3 685 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 ASIC3Q9UHC3 531 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 ANAPC5Q9UJX4 755 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 IGSF9BQ9UPX0 1349 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 SIP14410 1827 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 FSCN2O14926 492 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 OPHN1O60890 802 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 CSDE1O75534 798 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 OATP04181 439 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 HNRNPCP07910 306 aaKnown RBP eCLIP10.54□□□□□ -0.72
APTX-216ENST00000472896 ATF2P15336 505 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 EIF4BP23588 611 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 PGM1P36871 562 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 CCNFP41002 786 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 ACADVLP49748 655 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 NEK3P51956 506 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 ZNF200P98182 395 aaPredicted RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 CDC16Q13042 620 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 DCTN2Q13561 401 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 TMED2Q15363 201 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 PUS10Q3MIT2 529 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 KBTBD12Q3ZCT8 623 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 HERC4Q5GLZ8 1057 aaPredicted RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 TCEAL5Q5H9L2 206 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 TMPRSS6Q8IU80 811 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 CROCCP3Q8IVE0 287 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 GLYCTKQ8IVS8 523 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 MAP7D3Q8IWC1 876 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 DYDC2Q96IM9 177 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 NAP1L4Q99733 375 aaKnown RBP10.54□□□□□ -0.72
APTX-216ENST00000472896 THAP2Q9H0W7 228 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 GCNT4Q9P109 453 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 TUBGCP4Q9UGJ1 667 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 STX8Q9UNK0 236 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 ZNF318Q5VUA4 2279 aa10.54□□□□□ -0.72
APTX-216ENST00000472896 MYO7AQ13402 2215 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 TP73O15350 636 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 IL1BP01584 269 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 ATP5BP06576 529 aaKnown RBP10.53□□□□□ -0.72
APTX-216ENST00000472896 UQCRBP14927 111 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 ABCB4P21439 1286 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 IRS1P35568 1242 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 NOVP48745 357 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 ITGA8P53708 1063 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 GPC5P78333 572 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 CDK16Q00536 496 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 PLCB3Q01970 1234 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 SPIDRQ14159 915 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 IKBKEQ14164 716 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 HIC1Q14526 733 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 LY6KQ17RY6 165 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 KNOP1Q1ED39 458 aaKnown RBP10.53□□□□□ -0.72
APTX-216ENST00000472896 DNAL1Q4LDG9 190 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 EPC2Q52LR7 807 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 ZNF618Q5T7W0 954 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 SYDE2Q5VT97 1194 aa10.53□□□□□ -0.72
APTX-216ENST00000472896 PDSS2Q86YH6 399 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms