RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 PCSK1NQ9UHG2 260 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 CPB1P15086 417 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 LAG3P18627 525 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 MIPP30301 263 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 SDC4P31431 198 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 DAOAP59103 153 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 SLC25A11Q02978 314 aaKnown RBP28.81■■■□□ 2.2
HOXB3-207ENST00000472863 ITIH3Q06033 890 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 SEL1L2Q5TEA6 688 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 LRRC38Q5VT99 294 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 ARCQ7LC44 396 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 SCN4BQ8IWT1 228 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 KATNAL2Q8IYT4 538 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 ZWILCHQ9H900 591 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 CNGB3Q9NQW8 809 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 NR2E1Q9Y466 385 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 PCDHB5Q9Y5E4 795 aa28.81■■■□□ 2.2
HOXB3-207ENST00000472863 C2CD2LO14523 706 aa28.8■■■□□ 2.2
HOXB3-207ENST00000472863 DPYSL4O14531 572 aa28.8■■■□□ 2.2
HOXB3-207ENST00000472863 YWHAZP63104 245 aaKnown RBP28.8■■■□□ 2.2
HOXB3-207ENST00000472863 TTC9BQ8N6N2 239 aa28.8■■■□□ 2.2
HOXB3-207ENST00000472863 SCAMP5Q8TAC9 235 aa28.8■■■□□ 2.2
HOXB3-207ENST00000472863 TMEM169Q96HH4 297 aa28.8■■■□□ 2.2
HOXB3-207ENST00000472863 FUBP3Q96I24 572 aaKnown RBP eCLIP28.8■■■□□ 2.2
HOXB3-207ENST00000472863 ADAM33Q9BZ11 813 aa28.8■■■□□ 2.2
HOXB3-207ENST00000472863 CDY1Q9Y6F8 540 aa28.8■■■□□ 2.2
HOXB3-207ENST00000472863 YJEFN3A6XGL0 299 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 E7ENQ6 273 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 ADAM12O43184 909 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 HSF2BPO75031 334 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 FBXO21O94952 628 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 ZBED1O96006 694 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 RPL17P18621 184 aaKnown RBP28.79■■■□□ 2.2
HOXB3-207ENST00000472863 HTRA4P83105 476 aaPredicted RBP28.79■■■□□ 2.2
HOXB3-207ENST00000472863 GPR17Q13304 367 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 PSRC1Q6PGN9 363 aaPredicted RBP28.79■■■□□ 2.2
HOXB3-207ENST00000472863 RNF19BQ6ZMZ0 732 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 DEFB106AQ8N104 65 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 ZBED2Q9BTP6 218 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 SPG21Q9NZD8 308 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 KRIT1O00522 736 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 ZRANB2O95218 330 aaKnown RBP eCLIP28.79■■■□□ 2.2
HOXB3-207ENST00000472863 GPR15P49685 360 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 SMTNL2Q2TAL5 461 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 KCNT1Q5JUK3 1230 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 ZFYVE27Q5T4F4 411 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 SDHAF4Q5VUM1 108 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 KIAA1841Q6NSI8 718 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 ANKS1BQ7Z6G8 1248 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 FBXO22Q8NEZ5 403 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 FAM172AQ8WUF8 416 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 RNF25Q96BH1 459 aaPredicted RBP28.79■■■□□ 2.2
HOXB3-207ENST00000472863 DDX23Q9BUQ8 820 aaKnown RBP28.79■■■□□ 2.2
HOXB3-207ENST00000472863 PNPLA8Q9NP80 782 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 NGRNQ9NPE2 291 aaKnown RBP28.79■■■□□ 2.2
HOXB3-207ENST00000472863 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP28.79■■■□□ 2.26e-9■■■■□ 25.1
HOXB3-207ENST00000472863 USP18Q9UMW8 372 aa28.79■■■□□ 2.2
HOXB3-207ENST00000472863 TCRBV7S2A1N4TA0A589 114 aa28.78■■■□□ 2.2
HOXB3-207ENST00000472863 PI4K2BG5E9Z4 385 aa28.78■■■□□ 2.2
HOXB3-207ENST00000472863 VNN2O95498 520 aa28.78■■■□□ 2.2
HOXB3-207ENST00000472863 SOD2P04179 222 aa28.78■■■□□ 2.2
HOXB3-207ENST00000472863 RHOXF2BP0C7M4 288 aa28.78■■■□□ 2.2
HOXB3-207ENST00000472863 DDR2Q16832 855 aa28.78■■■□□ 2.2
HOXB3-207ENST00000472863 RHOXF2Q9BQY4 288 aa28.78■■■□□ 2.2
HOXB3-207ENST00000472863 SLC27A5Q9Y2P5 690 aa28.78■■■□□ 2.2
HOXB3-207ENST00000472863 TNFRSF10BO14763 440 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 PCK1P35558 622 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 MATKP42679 507 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 MRPS25P82663 173 aaKnown RBP28.77■■■□□ 2.2
HOXB3-207ENST00000472863 PSMD5Q16401 504 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 HADHQ16836 314 aaKnown RBP28.77■■■□□ 2.2
HOXB3-207ENST00000472863 BHLHA9Q7RTU4 235 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 ZDHHC14Q8IZN3 488 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 MMGT1Q8N4V1 131 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 STKLD1Q8NE28 680 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 EXD1Q8NHP7 514 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 PIK3R5Q8WYR1 880 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 RAPGEF5Q92565 580 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 PEBP4Q96S96 227 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 C11orf84Q9BUA3 381 aaPredicted RBP28.77■■■□□ 2.2
HOXB3-207ENST00000472863 HTATIP2Q9BUP3 242 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 CRISPLD1Q9H336 500 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 MTRRQ9UBK8 725 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 MTMR11A4FU01 709 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 TRUB2O95900 331 aaKnown RBP28.77■■■□□ 2.2
HOXB3-207ENST00000472863 FYNP06241 537 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 PTPN9P43378 593 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 DCAF6Q58WW2 860 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 SYPL2Q5VXT5 272 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 PM20D1Q6GTS8 502 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 VSTM1Q6UX27 236 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 SLC13A5Q86YT5 568 aaPredicted RBP28.77■■■□□ 2.2
HOXB3-207ENST00000472863 CCDC50Q8IVM0 306 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 HERVK_113Q902F9 699 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 HERPUD2Q9BSE4 406 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 USP3Q9Y6I4 520 aa28.77■■■□□ 2.2
HOXB3-207ENST00000472863 SOAT2O75908 522 aa28.76■■■□□ 2.19
HOXB3-207ENST00000472863 SLC5A3P53794 718 aa28.76■■■□□ 2.19
HOXB3-207ENST00000472863 IFRD2Q12894 506 aaPredicted RBP28.76■■■□□ 2.19
HOXB3-207ENST00000472863 POLNQ7Z5Q5 900 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms