RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, human

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD3-211	ENST00000472673	SERPINA13P	Q6UXR4	307 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	UNC13D	Q70J99	1090 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	RAB11FIP4	Q86YS3	637 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	SNX18	Q96RF0	628 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	VN1R3	Q9BXE9	311 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	SLC29A3	Q9BZD2	475 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	TFCP2L1	Q9NZI6	479 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	AMFR	Q9UKV5	643 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	SETD1B	Q9UPS6	1966 aa	Known RBP	4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673		H7C1Q1	480 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	LATS1	O95835	1130 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	MYCL	P12524	364 aa	Predicted RBP	4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	TPH1	P17752	444 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	EPHB2	P29323	1055 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	CARS	P49589	748 aa	Known RBP	4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	CPT1A	P50416	773 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	RENBP	P51606	427 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	ALDH5A1	P51649	535 aa	Predicted RBP	4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	PSG6	Q00889	435 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	STK3	Q13188	491 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	ZNF750	Q32MQ0	723 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	RNASE12	Q5GAN4	147 aa	Known RBP	4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	ASB2	Q96Q27	587 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	INO80B	Q9C086	356 aa	Predicted RBP	4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	DHX36	Q9H2U1	1008 aa	Known RBP	4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	LPAR3	Q9UBY5	353 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	SNX13	Q9Y5W8	968 aa		4.56	□□□□□ -1.68
COMMD3-211	ENST00000472673	WDR91	A4D1P6	747 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	AQP7P3	A6NL99	342 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	FGA	P02671	866 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	PRR35	P0CG20	571 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	CERS1	P27544	350 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	PGD	P52209	483 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	TIRAP	P58753	221 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	CERKL	Q49MI3	558 aa	Predicted RBP	4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	CEP78	Q5JTW2	689 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	CYB5RL	Q6IPT4	315 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	YTHDF3	Q7Z739	585 aa	Known RBP	4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	DGKH	Q86XP1	1220 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	SFTPA1	Q8IWL2	248 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	IPCEF1	Q8WWN9	437 aa	Predicted RBP	4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	RITA1	Q96K30	269 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	MSLNL	Q96KJ4	702 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	SNX22	Q96L94	193 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	C5orf34	Q96MH7	638 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	MMS19	Q96T76	1030 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	SH2D3A	Q9BRG2	576 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	SEMA4C	Q9C0C4	833 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	BTBD1	Q9H0C5	482 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	NUP62CL	Q9H1M0	184 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	RNF7	Q9UBF6	113 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	ZNF212	Q9UDV6	495 aa		4.55	□□□□□ -1.68
COMMD3-211	ENST00000472673	POC1B-GALNT4	F8VUJ3	575 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673		F8W8V4	182 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	PPP6C	O00743	305 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	PQBP1	O60828	265 aa	Known RBP	4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	INMT	O95050	263 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	MT-ND5	P03915	603 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	CREB1	P16220	341 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	RPL17	P18621	184 aa	Known RBP	4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	BTF3	P20290	206 aa	Known RBP	4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	KEL	P23276	732 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	IL1R2	P27930	398 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	GATM	P50440	423 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	KCNAB1	Q14722	419 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	MTX3	Q5HYI7	312 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	PLAG1	Q6DJT9	500 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	CATSPERG	Q6ZRH7	1159 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	PTCHD4	Q6ZW05	846 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	GALNT4	Q8N4A0	578 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	TTC17	Q96AE7	1141 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	STRBP	Q96SI9	672 aa	Known RBP	4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	QTRT1	Q9BXR0	403 aa	Known RBP	4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	FAM83D	Q9H4H8	585 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	TBC1D23	Q9NUY8	699 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	DKK4	Q9UBT3	224 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	CORO2B	Q9UQ03	480 aa		4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	COL3A1	P02461	1466 aa	Predicted RBP	4.54	□□□□□ -1.68
COMMD3-211	ENST00000472673	UBE2Q2L	H0YL09	131 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	INO80B-WBP1	J3KQ70	363 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673		M0R3H8	397 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	AGPS	O00116	658 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	EXOC5	O00471	708 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	SPRY2	O43597	315 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	GCAT	O75600	419 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	USP1	O94782	785 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	TUBB4A	P04350	444 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	PARP1	P09874	1014 aa	Known RBP	4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	NTSR1	P30989	418 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	ZNF81	P51508	661 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	COPB1	P53618	953 aa	Known RBP	4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	LMAN2	Q12907	356 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	FAM187B	Q17R55	369 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	ZNF626	Q68DY1	528 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	SLC18B1	Q6NT16	456 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	NEK8	Q86SG6	692 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	SDR16C5	Q8N3Y7	309 aa		4.53	□□□□□ -1.68
COMMD3-211	ENST00000472673	C11orf44	Q8N8P7	122 aa		4.53	□□□□□ -1.68

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