RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 MSH2P43246 934 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 RPL34P49207 117 aaKnown RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 BCAT1P54687 386 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 BST2Q10589 180 aaKnown RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 ORC1Q13415 861 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 LRRC14Q15048 493 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 MTFR1Q15390 333 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 CCDC14Q49A88 953 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 PPP1R26Q5T8A7 1209 aaPredicted RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 RNF43Q68DV7 783 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 C3orf62Q6ZUJ4 267 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 BZW1Q7L1Q6 419 aaKnown RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 DPH6Q7L8W6 267 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 UNC45BQ8IWX7 931 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 NME8Q8N427 588 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 ANKRD52Q8NB46 1076 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 BRI3BPQ8WY22 251 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 APBB2Q92870 758 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
APLF-204ENST00000471727 LRRC39Q96DD0 335 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 HSFY1Q96LI6 401 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 CYTH2Q99418 400 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 TRIM6Q9C030 488 aaPredicted RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.09□□□□□ -0.63
APLF-204ENST00000471727 GDAP2Q9NXN4 497 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 SNTG2Q9NY99 539 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 KLHL14Q9P2G3 628 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 XPO7Q9UIA9 1087 aaKnown RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 RABGEF1Q9UJ41 708 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 STARD13Q9Y3M8 1113 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 SNX9Q9Y5X1 595 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 IQANK1A0A1B0GTG1 560 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 H7C0C1 242 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 TM9SF1O15321 606 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 F2P00734 622 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 KCNE1P15382 129 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 HNRNPH1P31943 449 aaKnown RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 MAGEA6P43360 314 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 ATP5OP48047 213 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 NR2C2P49116 596 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 BCAR1P56945 870 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 GPX6P59796 221 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 PPARDQ03181 441 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 CCDC15Q0P6D6 951 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 MPP2Q14168 576 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 KIZQ2M2Z5 673 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 XKR4Q5GH76 650 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 C9orf57Q5W0N0 161 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 SLC9A4Q6AI14 798 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 PMF1Q6P1K2 205 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 CYP4V2Q6ZWL3 525 aaPredicted RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 SLC26A9Q7LBE3 791 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 PSTKQ8IV42 348 aaKnown RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 CDKL3Q8IVW4 592 aaPredicted RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 FAM71DQ8N9W8 422 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 FAF2Q96CS3 445 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 PEBP4Q96S96 227 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 PPP1R16BQ96T49 567 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 MRPL45Q9BRJ2 306 aaKnown RBP11.09□□□□□ -0.63
APLF-204ENST00000471727 DHRS4Q9BTZ2 278 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 PITPNM3Q9BZ71 974 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 PCDH18Q9HCL0 1135 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 SLC40A1Q9NP59 571 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 PNPLA8Q9NP80 782 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 SETD4Q9NVD3 440 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 PRKAG3Q9UGI9 489 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 SLC12A4Q9UP95 1085 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 Q9Y3F1 56 aa11.09□□□□□ -0.63
APLF-204ENST00000471727 A8MXQ7 604 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 PIRO00625 290 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 TRDMT1O14717 391 aaKnown RBP11.08□□□□□ -0.64
APLF-204ENST00000471727 SMIM10L2AP0DMW4 78 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 SMIM10L2BP0DMW5 78 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 GNAT1P11488 350 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 CYP2C9P11712 490 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 YBX3P16989 372 aaKnown RBP eCLIP11.08□□□□□ -0.64
APLF-204ENST00000471727 TAC1P20366 129 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 SKIV2L2P42285 1042 aaKnown RBP11.08□□□□□ -0.64
APLF-204ENST00000471727 GDF10P55107 478 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 BASP1P80723 227 aaKnown RBP11.08□□□□□ -0.64
APLF-204ENST00000471727 FASTKD3Q14CZ7 662 aaKnown RBP11.08□□□□□ -0.64
APLF-204ENST00000471727 PDK4Q16654 411 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 BBS9Q3SYG4 887 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 EFHC1Q5JVL4 640 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 FBXO47Q5MNV8 452 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 LGSNQ5TDP6 509 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 ACOT1Q86TX2 421 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 TTC30AQ86WT1 665 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 PLD5Q8N7P1 536 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 FBXO36Q8NEA4 188 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 OR6B3Q8NGW1 331 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 GDAP1Q8TB36 358 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 FAM172AQ8WUF8 416 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 CENPIQ92674 756 aaPredicted RBP11.08□□□□□ -0.64
APLF-204ENST00000471727 KAT2BQ92831 832 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 TNIP3Q96KP6 325 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 KLC2Q9H0B6 622 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 RXFP1Q9HBX9 757 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 KLC4Q9NSK0 619 aa11.08□□□□□ -0.64
APLF-204ENST00000471727 FGFR1OP2Q9NVK5 253 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms