RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 USP13Q92995 863 aaPredicted RBP16.12■□□□□ 0.17
SDC3-203ENST00000471567 RSPRY1Q96DX4 576 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 ASIC4Q96FT7 647 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 STK33Q9BYT3 514 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 TLR8Q9NR97 1041 aaKnown RBP16.12■□□□□ 0.17
SDC3-203ENST00000471567 GMIPQ9P107 970 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 CHORDC1Q9UHD1 332 aaPredicted RBP16.12■□□□□ 0.17
SDC3-203ENST00000471567 AJAP1Q9UKB5 411 aaPredicted RBP16.12■□□□□ 0.17
SDC3-203ENST00000471567 SIK3Q9Y2K2 1263 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 FHOD1Q9Y613 1164 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 MUC3AQ02505 3323 aa16.12■□□□□ 0.17
SDC3-203ENST00000471567 NUP210Q8TEM1 1887 aaPredicted RBP16.12■□□□□ 0.17
SDC3-203ENST00000471567 PATJQ8NI35 1801 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 ABL1P00519 1130 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 CKMP06732 381 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 TCF3P15923 654 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 GNA15P30679 374 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 PSEN1P49768 467 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 BPIFB4P59827 614 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 SLC7A9P82251 487 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 PTK2Q05397 1052 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 DRAP1Q14919 205 aaPredicted RBP16.11■□□□□ 0.17
SDC3-203ENST00000471567 SYCP1Q15431 976 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 FILIP1LQ4L180 1135 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 TMEM31Q5JXX7 168 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 HECTD3Q5T447 861 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 YAF2Q8IY57 180 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 BPIFB1Q8TDL5 484 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 SLC35F5Q8WV83 523 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 DNASE1L2Q92874 299 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 IRF7Q92985 503 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 SLC22A12Q96S37 553 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 CYP2S1Q96SQ9 504 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 GANQ9H2C0 597 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 LRRC4Q9HBW1 653 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 TRPV5Q9NQA5 729 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 THG1LQ9NWX6 298 aaKnown RBP16.11■□□□□ 0.17
SDC3-203ENST00000471567 FBXL21Q9UKT6 434 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 ARHGAP26Q9UNA1 814 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 TECTAO75443 2155 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 ANAPC1Q9H1A4 1944 aa16.11■□□□□ 0.17
SDC3-203ENST00000471567 PRR33A8MZF0 331 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 M0QYV0 167 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 TULP2O00295 520 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 ZNF263O14978 683 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 CHADO15335 359 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 CYP26A1O43174 497 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 THAP12O43422 761 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 CFHP08603 1231 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 GDI1P31150 447 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 TKTL1P51854 596 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 RAPGEF1Q13905 1077 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 GRM2Q14416 872 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 ARHGAP29Q52LW3 1261 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 PM20D1Q6GTS8 502 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 LUZP1Q86V48 1076 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 GPIHBP1Q8IV16 184 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 SCML4Q8N228 414 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 ARHGAP18Q8N392 663 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 ZNF276Q8N554 614 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 SECISBP2LQ93073 1101 aaKnown RBP16.1■□□□□ 0.17
SDC3-203ENST00000471567 HSFY1Q96LI6 401 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 LRRC3BQ96PB8 259 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 SMG9Q9H0W8 520 aaKnown RBP16.1■□□□□ 0.17
SDC3-203ENST00000471567 BRD9Q9H8M2 597 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 C11orf16Q9NQ32 467 aa16.1■□□□□ 0.17
SDC3-203ENST00000471567 RTN4Q9NQC3 1192 aaKnown RBP16.1■□□□□ 0.17
SDC3-203ENST00000471567 GOLGA6L19H0YKK7 550 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 CALCAP01258 141 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 CLCN1P35523 988 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 GPD2P43304 727 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 KLK7P49862 253 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 LRSAM1Q6UWE0 723 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 KIAA1958Q8N8K9 716 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 STK32AQ8WU08 396 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 PCMTD1Q96MG8 357 aaPredicted RBP16.09■□□□□ 0.17
SDC3-203ENST00000471567 RNF38Q9H0F5 515 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 CYLDQ9NQC7 956 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 FAM207AQ9NSI2 230 aaPredicted RBP16.09■□□□□ 0.17
SDC3-203ENST00000471567 CLIC5Q9NZA1 410 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 PCDHGC3Q9UN70 934 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 CCL26Q9Y258 94 aa16.09■□□□□ 0.17
SDC3-203ENST00000471567 A0A1B0GTH6 734 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 F8VZ95 297 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 COCHO43405 550 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 ZBED1O96006 694 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 RPL34P49207 117 aaKnown RBP16.08■□□□□ 0.16
SDC3-203ENST00000471567 POLR2FP61218 127 aaKnown RBP16.08■□□□□ 0.16
SDC3-203ENST00000471567 USP4Q13107 963 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 SLC44A4Q53GD3 710 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 PMF1Q6P1K2 205 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 KLHDC10Q6PID8 442 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 SCD5Q86SK9 330 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 TADA2BQ86TJ2 420 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 DDX42Q86XP3 938 aaKnown RBP eCLIP16.08■□□□□ 0.16
SDC3-203ENST00000471567 PBXIP1Q96AQ6 731 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 SHDQ96IW2 340 aa16.08■□□□□ 0.16
SDC3-203ENST00000471567 CDK5RAP1Q96SZ6 601 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms