RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 CD101Q93033 1021 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 IL37Q9NZH6 218 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 EHD2Q9NZN4 543 aa16.28■□□□□ 0.2
COL1A1-203ENST00000471344 CACNA1AO00555 2505 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 RTN3O95197 1032 aaPredicted RBP16.27■□□□□ 0.2
COL1A1-203ENST00000471344 KRT13P13646 458 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 TGM1P22735 817 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 OPRD1P41143 372 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 PDE6CP51160 858 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 INCA1Q0VD86 236 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 LONP2Q86WA8 852 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 RPLP0P6Q8NHW5 317 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 HHIPQ96QV1 700 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 NIF3L1Q9GZT8 377 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 TMEM8AQ9HCN3 771 aa16.27■□□□□ 0.2
COL1A1-203ENST00000471344 LAMA1P25391 3075 aa16.27■□□□□ 0.19
COL1A1-203ENST00000471344 MYOFQ9NZM1 2061 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 TRIM49BA6NDI0 452 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 HHLA1C9JL84 531 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 NFATC1O95644 943 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 PFKLP17858 780 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 DRD1P21728 446 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 RPL13P26373 211 aaKnown RBP16.26■□□□□ 0.19
COL1A1-203ENST00000471344 PPP3CCP48454 512 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 SIM2Q14190 667 aaPredicted RBP16.26■□□□□ 0.19
COL1A1-203ENST00000471344 BECN1Q14457 450 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 EDRF1Q3B7T1 1238 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 CLEC20AQ6ZU45 233 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 WDR5BQ86VZ2 330 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 UNC93AQ86WB7 457 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 C12orf40Q86WS4 652 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 ARID3AQ99856 593 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 CSNK1G1Q9HCP0 422 aa16.26■□□□□ 0.19
COL1A1-203ENST00000471344 FAM92AA1XBS5 289 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 CYP26A1O43174 497 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 CILPO75339 1184 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 TBX18O95935 607 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 ZDHHC11BP0C7U3 371 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 FAM200BP0CF97 657 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 IRF1P10914 325 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 SLC6A11P48066 632 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 SEC13P55735 322 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 AMPD2Q01433 879 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 SPEM2Q0P670 501 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 CBWD6Q4V339 395 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 ZNF394Q53GI3 561 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 CBWD3Q5JTY5 395 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 CBWD5Q5RIA9 395 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 HECTD3Q5T447 861 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 ISM2Q6H9L7 571 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 ADGRG2Q8IZP9 1017 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 PDZD8Q8NEN9 1154 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 OVCA2Q8WZ82 227 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 IMPG2Q9BZV3 1241 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 OSER1Q9NX31 292 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 PCDHA5Q9Y5H7 936 aa16.25■□□□□ 0.19
COL1A1-203ENST00000471344 K7EQS6 105 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 HOXA6P31267 233 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 MXI1P50539 228 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 MCCD1P59942 119 aaPredicted RBP16.24■□□□□ 0.19
COL1A1-203ENST00000471344 DHCR24Q15392 516 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 ZNF658Q5TYW1 1059 aaPredicted RBP16.24■□□□□ 0.19
COL1A1-203ENST00000471344 SNX30Q5VWJ9 437 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 KRT39Q6A163 491 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 ANKRD40Q6AI12 368 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 LAIR1Q6GTX8 287 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 RHBDF2Q6PJF5 856 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 SPATA20Q8TB22 786 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 TATDN2Q93075 761 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 CYFIP2Q96F07 1278 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 HNRNPABQ99729 332 aaKnown RBP16.24■□□□□ 0.19
COL1A1-203ENST00000471344 NT5C1AQ9BXI3 368 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 CYP3A43Q9HB55 503 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 GMEB2Q9UKD1 530 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 RAB23Q9ULC3 237 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 USP18Q9UMW8 372 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 SLC8A2Q9UPR5 921 aa16.24■□□□□ 0.19
COL1A1-203ENST00000471344 GOLGA6L4A6NEF3 574 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 MDM4O15151 490 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 TLR5O60602 858 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 EPB41P11171 864 aaKnown RBP16.23■□□□□ 0.19
COL1A1-203ENST00000471344 CHRM1P11229 460 aaPredicted RBP16.23■□□□□ 0.19
COL1A1-203ENST00000471344 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
COL1A1-203ENST00000471344 NUCB2P80303 420 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 KDSRQ06136 332 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 ENPEPQ07075 957 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 NR1H3Q13133 447 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 RSPO4Q2I0M5 234 aaPredicted RBP16.23■□□□□ 0.19
COL1A1-203ENST00000471344 DCAF17Q5H9S7 520 aaPredicted RBP16.23■□□□□ 0.19
COL1A1-203ENST00000471344 PPP1R26Q5T8A7 1209 aaPredicted RBP16.23■□□□□ 0.19
COL1A1-203ENST00000471344 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.23■□□□□ 0.19
COL1A1-203ENST00000471344 BBS7Q8IWZ6 715 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 ZC3H3Q8IXZ2 948 aaKnown RBP16.23■□□□□ 0.19
COL1A1-203ENST00000471344 FAM160A2Q8N612 972 aaPredicted RBP16.23■□□□□ 0.19
COL1A1-203ENST00000471344 NMUR1Q9HB89 426 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 ZDHHC4Q9NPG8 344 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 RMND1Q9NWS8 449 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 NUDT5Q9UKK9 219 aa16.23■□□□□ 0.19
COL1A1-203ENST00000471344 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.23■□□□□ 0.19
COL1A1-203ENST00000471344 CETN3O15182 167 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms