RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 KIAA0753Q2KHM9 967 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 MTX3Q5HYI7 312 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 CERCAMQ5T4B2 595 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 C11orf87Q6NUJ2 197 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 CCDC149Q6ZUS6 474 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 SRGAP1Q7Z6B7 1085 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 YTHDF3Q7Z739 585 aaKnown RBP6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 NEK8Q86SG6 692 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 METTL25Q8N6Q8 603 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 PNLDC1Q8NA58 520 aaKnown RBP6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 CIPCQ9C0C6 399 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 FAM204AQ9H8W3 233 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 MID2Q9UJV3 735 aa6.06□□□□□ -1.44
PRPF40A-206ENST00000471167 ZNF804BA4D1E1 1349 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 GOLIM4O00461 696 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 PPP6CO00743 305 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 PRKCBP05771 671 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 TXNP10599 105 aaKnown RBP6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 ZKSCAN1P17029 563 aaPredicted RBP6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 ATF7P17544 494 aaPredicted RBP6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 BTF3P20290 206 aaKnown RBP6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 PEX2P28328 305 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 ITGA8P53708 1063 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 TBC1D25Q3MII6 688 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 IGFBPL1Q8WX77 278 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 MSLNLQ96KJ4 702 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 C5orf34Q96MH7 638 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 PPP1R9BQ96SB3 815 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 SLC29A3Q9BZD2 475 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 PRDM16Q9HAZ2 1276 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 PDGFCQ9NRA1 345 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 CCNL1Q9UK58 526 aaPredicted RBP6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 PCDHGB6Q9Y5F9 930 aa6.05□□□□□ -1.44
PRPF40A-206ENST00000471167 CCP110O43303 1012 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 MARCH6O60337 910 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 RASAL1O95294 804 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 MCM5P33992 734 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 DIO1P49895 249 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 CACNB3P54284 484 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 LMAN2Q12907 356 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 ARHGEF7Q14155 803 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 KCNAB1Q14722 419 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 DAZAP2Q15038 168 aaPredicted RBP6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 SRSF7Q16629 238 aaKnown RBP eCLIP6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 AWAT1Q58HT5 328 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 SLC18B1Q6NT16 456 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 DARS2Q6PI48 645 aaKnown RBP6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 MTHFD1LQ6UB35 978 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 UNC13DQ70J99 1090 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 SPARTQ8N0X7 666 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 LINC01465Q8N7H1 131 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 SCARB1Q8WTV0 552 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 KAZALD1Q96I82 304 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 ASB2Q96Q27 587 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 MMS19Q96T76 1030 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 DPCDQ9BVM2 203 aaPredicted RBP6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 APOL5Q9BWW9 433 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 VN1R3Q9BXE9 311 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 DHX36Q9H2U1 1008 aaKnown RBP6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 TCEAL9Q9UHQ7 104 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 VPS51Q9UID3 782 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 AMFRQ9UKV5 643 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 ASAP1Q9ULH1 1129 aa6.04□□□□□ -1.44
PRPF40A-206ENST00000471167 A0A087WZ62 844 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 SMIM35A0A1B0GVV1 85 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 RAB27BO00194 218 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 RASSF9O75901 435 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 MAP4K4O95819 1239 aaPredicted RBP6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 TUBB4AP04350 444 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 DLDP09622 509 aaKnown RBP6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 CYP2A6P11509 494 aaPredicted RBP6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 MYCLP12524 364 aaPredicted RBP6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 APEHP13798 732 aaKnown RBP6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 KELP23276 732 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 IRX6P78412 446 aaPredicted RBP6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 SATB1Q01826 763 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 INSCQ1MX18 579 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 GFOD2Q3B7J2 385 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 CACHD1Q5VU97 1274 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 PLAG1Q6DJT9 500 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 SLC2A7Q6PXP3 512 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 USP49Q70CQ1 688 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 ZNF398Q8TD17 642 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 DAZAP1Q96EP5 407 aaKnown RBP6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 SEMA4CQ9C0C4 833 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 LRRC27Q9C0I9 530 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 DDX21Q9NR30 783 aaKnown RBP eCLIP6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 ZSCAN32Q9NX65 697 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 RIMKLBQ9ULI2 386 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 CAPN11Q9UMQ6 739 aa6.03□□□□□ -1.44
PRPF40A-206ENST00000471167 PLEKHD1A6NEE1 506 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 POC1B-GALNT4F8VUJ3 575 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 PARP1P09874 1014 aaKnown RBP6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 ACVR2AP27037 513 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 NTSR1P30989 418 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 CPT1AP50416 773 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 FAM193AP78312 1265 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 DEUP1Q05D60 604 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 EZH2Q15910 746 aaKnown RBP6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 LCE1AQ5T7P2 110 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms