RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 FANCGO15287 622 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 DGKIO75912 1065 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 HTR3BO95264 441 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 TIAF1O95411 115 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 HLA-DRAP01903 254 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 FGBP02675 491 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 THP07101 528 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 TMEM191BP0C7N4 346 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 GTF2H1P32780 548 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 ETFBP38117 255 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 MYL6P60660 151 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 DSC1Q08554 894 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 BIRC3Q13489 604 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 SURF1Q15526 300 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 EXOC3L4Q17RC7 722 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 FILIP1LQ4L180 1135 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 TMEM201Q5SNT2 666 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 TRIM65Q6PJ69 517 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 CD300LGQ6UXG3 332 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 CCDC81Q6ZN84 652 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 C12orf40Q86WS4 652 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 VSTM4Q8IW00 320 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 ARHGEF19Q8IW93 802 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 CD302Q8IX05 232 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 DRC7Q8IY82 874 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 FBXL13Q8NEE6 735 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 CACTINQ8WUQ7 758 aaKnown RBP5.07□□□□□ -1.6
SF3B1-208ENST00000470268 KAT5Q92993 513 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 ZNF689Q96CS4 500 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-208ENST00000470268 TTYH3Q9C0H2 523 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 GSX1Q9H4S2 264 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-208ENST00000470268 FAM207AQ9NSI2 230 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-208ENST00000470268 RAB20Q9NX57 234 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 DPP3Q9NY33 737 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 GCNT4Q9P109 453 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 DNAJB4Q9UDY4 337 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 ADAM30Q9UKF2 790 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 UBQLN1Q9UMX0 589 aaKnown RBP5.07□□□□□ -1.6
SF3B1-208ENST00000470268 HIF3AQ9Y2N7 669 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 DERAQ9Y315 318 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 RNF114Q9Y508 228 aa5.07□□□□□ -1.6
SF3B1-208ENST00000470268 TNRC18O15417 2968 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-208ENST00000470268 A0A1W2PQC6 194 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 GTPBP10A4D1E9 387 aaKnown RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 CASTOR2A6NHX0 329 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 H0YGN5 161 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 PIRO00625 290 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 P4HA2O15460 535 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 BAIAP3O94812 1187 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 ASS1P00966 412 aaKnown RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 GYPCP04921 128 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 ITGB1P05556 798 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 KRT19P08727 400 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 ADH5P11766 374 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 MSNP26038 577 aaKnown RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 LRPAP1P30533 357 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 POLR2BP30876 1174 aaKnown RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 PBX3P40426 434 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 CLCNKBP51801 687 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 AP3M2P53677 418 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 GRIK3Q13003 919 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 UPP1Q16831 310 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 PAN2Q504Q3 1202 aaKnown RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 NOMO2Q5JPE7 1267 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 KLHDC7AQ5VTJ3 777 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 C9orf57Q5W0N0 161 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 ANKRD34AQ69YU3 496 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 FAM109BQ6ICB4 259 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 PSRC1Q6PGN9 363 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 GLB1LQ6UWU2 654 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 GBP6Q6ZN66 633 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 FAM43BQ6ZT52 329 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 RRAGAQ7L523 313 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 DPH6Q7L8W6 267 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 USP37Q86T82 979 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 HACE1Q8IYU2 909 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 HERVK_113Q902F9 699 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 ANKRD36BP1Q96IX9 119 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 RPS6KC1Q96S38 1066 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 WNT10AQ9GZT5 417 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 INTS2Q9H0H0 1204 aaKnown RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 GANQ9H2C0 597 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 ATXN3LQ9H3M9 355 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 NRDE2Q9H7Z3 1164 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 UBN1Q9NPG3 1134 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 AGAP1Q9UPQ3 857 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 NUB1Q9Y5A7 615 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 FHOD1Q9Y613 1164 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 TBKBP1A7MCY6 615 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 CBFA2T2O43439 604 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 STX10O60499 249 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 EFCAB14O75071 495 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 N4BP1O75113 896 aaKnown RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 GJB5O95377 273 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 TNNC2P02585 160 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 AMHP03971 560 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 TPM2P07951 284 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 LINC00271P0C7V0 271 aa5.06□□□□□ -1.6
SF3B1-208ENST00000470268 PNMA6AP0CW24 399 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-208ENST00000470268 UCHL3P15374 230 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms