RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 PABPC1LQ4VXU2 614 aaKnown RBP15.58■□□□□ 0.08
COL9A3-209ENST00000469852 C2CD6Q53TS8 623 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 STXBP5Q5T5C0 1151 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 BHLHA9Q7RTU4 235 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 FMNL3Q8IVF7 1028 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 SLC30A5Q8TAD4 765 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 SHKBP1Q8TBC3 707 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 CEP295NLQ96MC4 621 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 UHRF1Q96T88 793 aaPredicted RBP15.58■□□□□ 0.08
COL9A3-209ENST00000469852 ULBP1Q9BZM6 244 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 ASAH2Q9NR71 780 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 ST7Q9NRC1 585 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 SEPT11Q9NVA2 429 aaKnown RBP15.58■□□□□ 0.08
COL9A3-209ENST00000469852 COG5Q9UP83 839 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 USP3Q9Y6I4 520 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 CLUHO75153 1309 aa15.58■□□□□ 0.08
COL9A3-209ENST00000469852 A0A1W2PRU2 124 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 RTN3O95197 1032 aaPredicted RBP15.57■□□□□ 0.08
COL9A3-209ENST00000469852 LSM8O95777 96 aaKnown RBP15.57■□□□□ 0.08
COL9A3-209ENST00000469852 ERBB2P04626 1255 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 USP17L7P0C7H9 530 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 BMP1P13497 986 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 CEBPBP17676 345 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 COL9A1P20849 921 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 YWHAQP27348 245 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 EIF4A3P38919 411 aaKnown RBP15.57■□□□□ 0.08
COL9A3-209ENST00000469852 TAF10Q12962 218 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 SMAD4Q13485 552 aaKnown RBP15.57■□□□□ 0.08
COL9A3-209ENST00000469852 CES5AQ6NT32 575 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 CYP26C1Q6V0L0 522 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 TMEM35BQ8NCS4 154 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 STK32AQ8WU08 396 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 ING5Q8WYH8 240 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 FBXO32Q969P5 355 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 PIWIL1Q96J94 861 aaKnown RBP15.57■□□□□ 0.08
COL9A3-209ENST00000469852 PPP1R13BQ96KQ4 1090 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 HSFY1Q96LI6 401 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 MIS12Q9H081 205 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 NMUR1Q9HB89 426 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 LRRC4Q9HBW1 653 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 WDR6Q9NNW5 1121 aaKnown RBP15.57■□□□□ 0.08
COL9A3-209ENST00000469852 OSER1Q9NX31 292 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 GMIPQ9P107 970 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 BDP1A6H8Y1 2624 aa15.57■□□□□ 0.08
COL9A3-209ENST00000469852 DOCK8Q8NF50 2099 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 PAPSS1O43252 624 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-209ENST00000469852 TNFAIP3P21580 790 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 CENPCQ03188 943 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 PTP4A2Q12974 167 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 CBX2Q14781 532 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-209ENST00000469852 TEAD2Q15562 447 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 ASTE1Q2TB18 679 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-209ENST00000469852 ATAT1Q5SQI0 421 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 CYP4A22Q5TCH4 519 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 PDZD4Q76G19 769 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-209ENST00000469852 SCD5Q86SK9 330 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 TMEM110Q86TL2 294 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 SCUBE3Q8IX30 993 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 RIPOR3Q96MK2 946 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 AVENQ9NQS1 362 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-209ENST00000469852 IMPACTQ9P2X3 320 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 CHORDC1Q9UHD1 332 aaPredicted RBP15.56■□□□□ 0.08
COL9A3-209ENST00000469852 ADAMTS1Q9UHI8 967 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 SCML2Q9UQR0 700 aa15.56■□□□□ 0.08
COL9A3-209ENST00000469852 NCOR1O75376 2440 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 TCF20Q9UGU0 1960 aaKnown RBP15.55■□□□□ 0.08
COL9A3-209ENST00000469852 A0A087X0T9 212 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 A0A1W2PQH9 124 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 TMCO5BA8MYB1 307 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 ZBED1O96006 694 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 ZDHHC11BP0C7U3 371 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 FAM228BP0C875 321 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 IL9P15248 144 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 FSHRP23945 695 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 MTHFRP42898 656 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 KCNQ1P51787 676 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 DAOAP59103 153 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 PM20D1Q6GTS8 502 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 PTCRAQ6ISU1 281 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-209ENST00000469852 TRIM72Q6ZMU5 477 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 MMS22LQ6ZRQ5 1243 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 HFE2Q6ZVN8 426 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 FAM183BPQ6ZVS7 135 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 GET4Q7L5D6 327 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-209ENST00000469852 CCDC186Q7Z3E2 898 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 SIX6OS1Q8N1H7 587 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 NECAB3Q96P71 396 aaPredicted RBP15.55■□□□□ 0.08
COL9A3-209ENST00000469852 PANX2Q96RD6 677 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 C11orf70Q9BRQ4 267 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 ATXN3LQ9H3M9 355 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 FBXO44Q9H4M3 255 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 COMMD8Q9NX08 183 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 RAPGEFL1Q9UHV5 662 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 NENFQ9UMX5 172 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 MRPS23Q9Y3D9 190 aaKnown RBP15.55■□□□□ 0.08
COL9A3-209ENST00000469852 CEP83Q9Y592 693 aa15.55■□□□□ 0.08
COL9A3-209ENST00000469852 BZW2Q9Y6E2 419 aaKnown RBP15.55■□□□□ 0.08
COL9A3-209ENST00000469852 NCANO14594 1321 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 C2orf78A6NCI8 922 aa15.54■□□□□ 0.08
COL9A3-209ENST00000469852 ZNF840PA6NDX5 716 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms