RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 TAF10Q12962 218 aa13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 MYO1EQ12965 1108 aa13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 TRIP6Q15654 476 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 TRMT11Q7Z4G4 463 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 PDZD3Q86UT5 571 aa13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 ZNF513Q8N8E2 541 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 MYCBPAPQ8TBZ2 947 aa13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 KCNV2Q8TDN2 545 aa13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 HPDLQ96IR7 371 aa13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 C8orf48Q96LL4 319 aa13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 CBWD1Q9BRT8 395 aa13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 TBC1D14Q9P2M4 693 aa13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 MYO18AQ92614 2054 aaKnown RBP13.67□□□□□ -0.22
TRAPPC12-216ENST00000469400 HELZP42694 1942 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 SMG1Q96Q15 3661 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 IGHV1OR15-9A0A0B4J2B8 117 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 H3BQV1 296 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 TULP3O75386 442 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 SYPP08247 313 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 WARSP23381 471 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 GAD2Q05329 585 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 SLC14A1Q13336 389 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 COL28A1Q2UY09 1125 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 MDH1BQ5I0G3 518 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 TDRD10Q5VZ19 366 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 DDX42Q86XP3 938 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 MIB1Q86YT6 1006 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 SLC41A1Q8IVJ1 513 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 ETFBKMTQ8IXQ9 262 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 NAT16Q8N8M0 369 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 TRIML1Q8N9V2 468 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 NOC3LQ8WTT2 800 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 ADAMTS14Q8WXS8 1223 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 KIF2CQ99661 725 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 PCIF1Q9H4Z3 704 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 INTS13Q9NVM9 706 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 SEL1LQ9UBV2 794 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 HCN2Q9UL51 889 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 R3HCC1Q9Y3T6 440 aaKnown RBP13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 MYOFQ9NZM1 2061 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 PLXND1Q9Y4D7 1925 aa13.66□□□□□ -0.22
TRAPPC12-216ENST00000469400 APC2O95996 2303 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 ACACAQ13085 2346 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 PTPRJQ12913 1337 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 PCDH15Q96QU1 1955 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 ADAMTS20P59510 1910 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 ADAMTS9Q9P2N4 1935 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 A0A1W2PQD8 194 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 A0A1W2PQF6 199 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 E2F8A0AVK6 867 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 HOXC11O43248 304 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 GJB3O75712 270 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 GCNT3O95395 438 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 FTH1P19P0C7X4 201 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 HOXB2P14652 356 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 WASP42768 502 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 CASP5P51878 434 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 CACNA2D1P54289 1103 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 C10orf76Q5T2E6 689 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 BTBD8Q5XKL5 378 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 CCNI2Q6ZMN8 369 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 HS2ST1Q7LGA3 356 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 SYCP3Q8IZU3 236 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 PNPLA1Q8N8W4 532 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 OR5B17Q8NGF7 314 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 OTUB2Q96DC9 234 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 ANKRD36BP1Q96IX9 119 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 HSPA12BQ96MM6 686 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 SLITRK1Q96PX8 696 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 MMS19Q96T76 1030 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 CCDC86Q9H6F5 360 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 TMEM30AQ9NV96 361 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 DEC1Q9P2X7 70 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 PCDHB9Q9Y5E1 797 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 PCDHB13Q9Y5F0 798 aa13.65□□□□□ -0.22
TRAPPC12-216ENST00000469400 IGSF10Q6WRI0 2623 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 CELSR3Q9NYQ7 3312 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 TRIM24O15164 1050 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 COCHO43405 550 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 ZNF217O75362 1048 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 BMP15O95972 392 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 GAP43P17677 238 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 YWHAQP27348 245 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 NTSR1P30989 418 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 GNL1P36915 607 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 IFRD2Q12894 506 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 PLEKHG6Q3KR16 790 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 PREPLQ4J6C6 727 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 USP49Q70CQ1 688 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 TMEM25Q86YD3 366 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 TERB1Q8NA31 727 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 DNAJC19Q96DA6 116 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 ERLEC1Q96DZ1 483 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 ZNF419Q96HQ0 510 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 EPSTI1Q96J88 318 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 MRPL45Q9BRJ2 306 aaKnown RBP13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 CD248Q9HCU0 757 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 CYP8B1Q9UNU6 501 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms