RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 CYP4A22Q5TCH4 519 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 KLHDC7AQ5VTJ3 777 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SNX30Q5VWJ9 437 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SPOPLQ6IQ16 392 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 PHLDB3Q6NSJ2 640 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 DPY19L2P1Q6NXN4 242 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 PPP1R2P3Q6NXS1 205 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 KLHDC10Q6PID8 442 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SARM1Q6SZW1 724 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 TMEM270Q6UE05 265 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 LYPD4Q6UWN0 246 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 LCLAT1Q6UWP7 414 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 OTOP3Q7RTS5 596 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 FAM35AQ86V20 835 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 LUZP1Q86V48 1076 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 OSTM1Q86WC4 334 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ZNF677Q86XU0 584 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 PALB2Q86YC2 1186 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ADHFE1Q8IWW8 467 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 FAM71AQ8IYT1 594 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ZDHHC14Q8IZN3 488 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 FUKQ8N0W3 1084 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 PPM1KQ8N3J5 372 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 Q8N3U1 123 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ZNF276Q8N554 614 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ANKRD52Q8NB46 1076 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SLC4A11Q8NBS3 891 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ATAD1Q8NBU5 361 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 PDZD8Q8NEN9 1154 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SMG7Q92540 1137 aaKnown RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 MYLPFQ96A32 169 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 E2F7Q96AV8 911 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SCARF2Q96GP6 870 aaPredicted RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 FAM84AQ96KN4 292 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ZNF512Q96ME7 567 aaPredicted RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 KREMEN1Q96MU8 473 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ARID3AQ99856 593 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 MRPL45Q9BRJ2 306 aaKnown RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ARHGAP9Q9BRR9 750 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 TRIM62Q9BVG3 475 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 NUP58Q9BVL2 599 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 TTLL2Q9BWV7 592 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 LRRC3Q9BY71 257 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 STK33Q9BYT3 514 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SDCBP2Q9H190 292 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 NUCKS1Q9H1E3 243 aaKnown RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 LHX5Q9H2C1 402 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 FBXO44Q9H4M3 255 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 TRPV4Q9HBA0 871 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 SIX2Q9NPC8 291 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 CYLDQ9NQC7 956 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ASAH2Q9NR71 780 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 OBP2AQ9NY56 170 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ABI2Q9NYB9 513 aaPredicted RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 IL37Q9NZH6 218 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 EPS15L1Q9UBC2 864 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 GTF3C4Q9UKN8 822 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 CDH7Q9ULB5 785 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 POLIQ9UNA4 740 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 USP15Q9Y4E8 981 aaPredicted RBP3.73□□□□□ -1.81
TRIM59-202ENST00000468542 FANCMQ8IYD8 2048 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 VPS13AQ96RL7 3174 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 CACNA1HO95180 2353 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 MYO15AQ9UKN7 3530 aa3.73□□□□□ -1.81
TRIM59-202ENST00000468542 ZNF292O60281 2723 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 TECTAO75443 2155 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 A0A1W2PQJ5 194 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 ESPNB1AK53 854 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 LOC730098B7Z3J9 87 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 ANHXE9PGG2 379 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 F8VP50 259 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 H3BQ06 376 aaPredicted RBP3.72□□□□□ -1.81
TRIM59-202ENST00000468542 TNFRSF10BO14763 440 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 XPO1O14980 1071 aaKnown RBP3.72□□□□□ -1.81
TRIM59-202ENST00000468542 CBFA2T2O43439 604 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 LILRA1O75019 489 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 ADAM23O75077 832 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 ATP2C2O75185 946 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 LRRN2O75325 713 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 RFPL2O75678 378 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 CLSTN1O94985 981 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 OLFM2O95897 454 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 SERPINC1P01008 464 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 ITGB2P05107 769 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 RHOP08100 348 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 PDGFRBP09619 1106 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 OR4Q2P0C623 313 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 ZDHHC11BP0C7U3 371 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 TCF3P15923 654 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 HMGA1P17096 107 aaKnown RBP3.72□□□□□ -1.81
TRIM59-202ENST00000468542 CD58P19256 250 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 SLC9A1P19634 815 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 ACAT1P24752 427 aaKnown RBP3.72□□□□□ -1.81
TRIM59-202ENST00000468542 CYP2F1P24903 491 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 ANXA13P27216 316 aa3.72□□□□□ -1.81
TRIM59-202ENST00000468542 HNRNPH3P31942 346 aaKnown RBP3.72□□□□□ -1.81
TRIM59-202ENST00000468542 CDH5P33151 784 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms