RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 RGS7P49802 495 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 YWHAZP63104 245 aaKnown RBP10.65□□□□□ -0.7
MSH5-213ENST00000468136 KRT17Q04695 432 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 KRT81Q14533 505 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 TIGD5Q53EQ6 642 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 MDH1BQ5I0G3 518 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 RAB41Q5JT25 222 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 ERMARDQ5T6L9 678 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 OVOS1Q6IE37 1185 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 TTC27Q6P3X3 843 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 GSTA5Q7RTV2 222 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 ANKRD33Q7Z3H0 272 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 TMC3Q7Z5M5 1100 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 FAM35AQ86V20 835 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 CPNE8Q86YQ8 564 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 RELL1Q8IUW5 271 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 SCUBE3Q8IX30 993 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 EMC1Q8N766 993 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 RNF169Q8NCN4 708 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 SLC35B2Q8TB61 432 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.65□□□□□ -0.7
MSH5-213ENST00000468136 FAM172AQ8WUF8 416 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 C1orf54Q8WWF1 131 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 RAPGEF5Q92565 580 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 KHSRPQ92945 711 aaKnown RBP eCLIP10.65□□□□□ -0.7
MSH5-213ENST00000468136 NT5C3BQ969T7 300 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 PGAP3Q96FM1 320 aaPredicted RBP10.65□□□□□ -0.7
MSH5-213ENST00000468136 FUBP3Q96I24 572 aaKnown RBP eCLIP10.65□□□□□ -0.7
MSH5-213ENST00000468136 CCDC114Q96M63 670 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 CEP295NLQ96MC4 621 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 SLC2A13Q96QE2 648 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 FERMT1Q9BQL6 677 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 TRIM51Q9BSJ1 452 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 C11orf84Q9BUA3 381 aaPredicted RBP10.65□□□□□ -0.7
MSH5-213ENST00000468136 COLEC11Q9BWP8 271 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 FRMD8Q9BZ67 464 aaPredicted RBP10.65□□□□□ -0.7
MSH5-213ENST00000468136 POPDC2Q9HBU9 364 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 PCDH9Q9HC56 1237 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 DMAP1Q9NPF5 467 aaPredicted RBP10.65□□□□□ -0.7
MSH5-213ENST00000468136 CHST7Q9NS84 486 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 PSD3Q9NYI0 1048 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 TJP2Q9UDY2 1190 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 ZNF148Q9UQR1 794 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 SNX24Q9Y343 169 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 PCDHB7Q9Y5E2 793 aa10.65□□□□□ -0.7
MSH5-213ENST00000468136 TCRBV7S2A1N4TA0A589 114 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 ZSCAN5CA6NGD5 496 aaPredicted RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 OR6C75A6NL08 312 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 MEIS3P2A8K0S8 358 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 HMGB1P1B2RPK0 211 aaPredicted RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 CST8O60676 142 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 AP1G2O75843 785 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 OAZ2O95190 189 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 POMCP01189 267 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 CXCL10P02778 98 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 NUDT17P0C025 328 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 IL1R2P27930 398 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 GJC1P36383 396 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 ADCY8P40145 1251 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 RPL21P46778 160 aaKnown RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 ARSEP51690 589 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 PLTPP55058 493 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 CDH6P55285 790 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 YWHAHQ04917 246 aaPredicted RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 RNASELQ05823 741 aaKnown RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 DHX9Q08211 1270 aaKnown RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 XRCC4Q13426 336 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 MORF4L2Q15014 288 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 OASLQ15646 514 aaKnown RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 DPYSL2Q16555 572 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 VSTM1Q6UX27 236 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 CLEC20AQ6ZU45 233 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 PAQR9Q6ZVX9 377 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 HOOK3Q86VS8 718 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 GSPT2Q8IYD1 628 aaKnown RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 COLGALT2Q8IYK4 626 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 ALLCQ8N6M5 410 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 ARFGAP1Q8N6T3 406 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 ANKLE1Q8NAG6 615 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 NTAN1Q96AB6 310 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 FAF2Q96CS3 445 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 PCED1BQ96HM7 432 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 RNF157Q96PX1 679 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 HEMGNQ9BXL5 484 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 B3GNT5Q9BYG0 378 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 TXLNGYQ9BZA5 131 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 STMN4Q9H169 189 aaPredicted RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 DPH5Q9H2P9 285 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 PABPC3Q9H361 631 aaKnown RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 ZWILCHQ9H900 591 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 NGRNQ9NPE2 291 aaKnown RBP10.64□□□□□ -0.71
MSH5-213ENST00000468136 CRTAC1Q9NQ79 661 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 KRT82Q9NSB4 513 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 COMMD8Q9NX08 183 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 GRHL1Q9NZI5 618 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 LRFN2Q9ULH4 789 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 NEU2Q9Y3R4 380 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 RAD54BQ9Y620 910 aa10.64□□□□□ -0.71
MSH5-213ENST00000468136 SF3B1O75533 1304 aaKnown RBP eCLIP10.63□□□□□ -0.71
MSH5-213ENST00000468136 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms